G1509679


Basic Information

Item Value
gene id G1509679
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 1356060 ~ 1356399 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1726970
gagacaacaacagaaccctgatgactggagagacaacaacagaactctgatgactggagagacaacaacagaaccctgatgactggagagacaacaacagaaccctgatgactggagagacaacaacagaaccctgatgactggacagacaacaacagaaccctgatgactggagagataacaacagaaccctgatgactggagagacaacaacagaaccctgatgactggagagacaacaacagaactCTGATGACTGGAGTTTAAGATCCAAATTACCTTTCGTAATGCAATGCCATCTGTCCTGAGGTGGCAGTATAATCTTAAAATCAAACTAAAT

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1726970 True 340 lncRNA 0.44 1 1356060 1356399

Neighbor

gene id symbol gene type direction distance location
LOC118941054 NA coding upstream 496261 854370 ~ 859799 (+)
LOC110495331 LOC106593605 coding upstream 563374 789678 ~ 792686 (+)
LOC118941073 LOC106575007 coding upstream 571187 774850 ~ 784873 (+)
LOC110515393 LOC106575008 coding upstream 734621 589742 ~ 621439 (+)
LOC110515805 LOC106575000 coding upstream 785931 554930 ~ 570129 (+)
LOC118941055 NA coding downstream 374825 1731224 ~ 1732090 (+)
tdrd3 LOC106592742 coding downstream 1021534 2377933 ~ 2453770 (+)
LOC118941056 NA coding downstream 1857639 3214038 ~ 3214454 (+)
LOC118941057 NA coding downstream 1943042 3299441 ~ 3300228 (+)
LOC118941040 LOC106593609 coding downstream 3261689 4618088 ~ 4624857 (+)
G1509602 NA non-coding upstream 21143 1334176 ~ 1334917 (+)
G1509600 NA non-coding upstream 22679 1332194 ~ 1333381 (+)
G1509578 NA non-coding upstream 60547 1292143 ~ 1295513 (+)
G1509557 NA non-coding upstream 110409 1243840 ~ 1245651 (+)
G1509554 NA non-coding upstream 122540 1232971 ~ 1233520 (+)
G1509695 NA non-coding downstream 29634 1386033 ~ 1386715 (+)
G1509699 NA non-coding downstream 37710 1394109 ~ 1394603 (+)
G1509712 NA non-coding downstream 66379 1422778 ~ 1423311 (+)
G1509739 NA non-coding downstream 162619 1519018 ~ 1519508 (+)
G1509795 NA non-coding downstream 171752 1528151 ~ 1528384 (+)
G1509212 NA other upstream 574857 780789 ~ 781203 (+)
G1509068 NA other upstream 748853 606622 ~ 607207 (+)
G1509015 NA other upstream 911183 442803 ~ 444877 (+)
G1508979 NA other upstream 988629 364927 ~ 367431 (+)
G1509697 NA other downstream 31632 1388031 ~ 1389178 (+)
G1509914 NA other downstream 325893 1682292 ~ 1682858 (+)
G1510408 LOC106576654 other downstream 1177913 2534312 ~ 2534675 (+)
G1510524 LOC106597055 other downstream 1348443 2704842 ~ 2705497 (+)

Expression


Co-expression Network