Gene
RNA
| Item | Value |
|---|---|
| gene id | G1509712 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 1422778 ~ 1423311 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1727004 | False | 267 | lncRNA | 0.34 | 2 | 1422778 | 1423311 |
| TU1727003 | True | 233 | lncRNA | 0.34 | 2 | 1422956 | 1423311 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941054 | NA | coding | upstream | 562979 | 854370 ~ 859799 (+) |
| LOC110495331 | LOC106593605 | coding | upstream | 630092 | 789678 ~ 792686 (+) |
| LOC118941073 | LOC106575007 | coding | upstream | 637905 | 774850 ~ 784873 (+) |
| LOC110515393 | LOC106575008 | coding | upstream | 801339 | 589742 ~ 621439 (+) |
| LOC110515805 | LOC106575000 | coding | upstream | 852649 | 554930 ~ 570129 (+) |
| LOC118941055 | NA | coding | downstream | 307913 | 1731224 ~ 1732090 (+) |
| tdrd3 | LOC106592742 | coding | downstream | 954622 | 2377933 ~ 2453770 (+) |
| LOC118941056 | NA | coding | downstream | 1790727 | 3214038 ~ 3214454 (+) |
| LOC118941057 | NA | coding | downstream | 1876130 | 3299441 ~ 3300228 (+) |
| LOC118941040 | LOC106593609 | coding | downstream | 3194777 | 4618088 ~ 4624857 (+) |
| G1509699 | NA | non-coding | upstream | 28175 | 1394109 ~ 1394603 (+) |
| G1509695 | NA | non-coding | upstream | 36063 | 1386033 ~ 1386715 (+) |
| G1509679 | NA | non-coding | upstream | 66379 | 1356060 ~ 1356399 (+) |
| G1509602 | NA | non-coding | upstream | 87861 | 1334176 ~ 1334917 (+) |
| G1509600 | NA | non-coding | upstream | 89397 | 1332194 ~ 1333381 (+) |
| G1509739 | NA | non-coding | downstream | 95707 | 1519018 ~ 1519508 (+) |
| G1509795 | NA | non-coding | downstream | 104840 | 1528151 ~ 1528384 (+) |
| G1509813 | NA | non-coding | downstream | 119911 | 1543222 ~ 1543424 (+) |
| G1509818 | NA | non-coding | downstream | 126749 | 1550060 ~ 1550266 (+) |
| G1509819 | NA | non-coding | downstream | 127695 | 1551006 ~ 1551282 (+) |
| G1509697 | NA | other | upstream | 33600 | 1388031 ~ 1389178 (+) |
| G1509212 | NA | other | upstream | 641575 | 780789 ~ 781203 (+) |
| G1509068 | NA | other | upstream | 815571 | 606622 ~ 607207 (+) |
| G1509015 | NA | other | upstream | 977901 | 442803 ~ 444877 (+) |
| G1509914 | NA | other | downstream | 258981 | 1682292 ~ 1682858 (+) |
| G1510408 | LOC106576654 | other | downstream | 1111001 | 2534312 ~ 2534675 (+) |
| G1510524 | LOC106597055 | other | downstream | 1281531 | 2704842 ~ 2705497 (+) |
| G1510527 | NA | other | downstream | 1285402 | 2708713 ~ 2709747 (+) |
