G1509739


Basic Information

Item Value
gene id G1509739
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 1519018 ~ 1519508 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1727035
tgcagacagagacagtagaggtGGGACTACCTGGTTAGTCTGGTCTCTATAAAGGGGACAGCAGGctgcagacagagacagtagaggtGGGAGTACCTGCTTAGTCTGGTCTCTATAAAGGGGACAGCAGGctgcagacagagacagtagaggtGGTAGTACCTGGTTAGTCTCTATAAAGGGGACAGCaggctacagacagagacagtagaggtGGGACTACCTGGTTAGTCTGGTCTCTATAAAGGGGACAGCAGGTTATGTTTAACCTTCTGCTGAGGTTACCAGGACTGGGTTATGTTTAACCTTCTGCTGAGGTTAACAGGACTGGGTTATGTTAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1727035 True 343 lncRNA 0.49 2 1519018 1519508

Neighbor

gene id symbol gene type direction distance location
LOC118941054 NA coding upstream 659219 854370 ~ 859799 (+)
LOC110495331 LOC106593605 coding upstream 726332 789678 ~ 792686 (+)
LOC118941073 LOC106575007 coding upstream 734145 774850 ~ 784873 (+)
LOC110515393 LOC106575008 coding upstream 897579 589742 ~ 621439 (+)
LOC110515805 LOC106575000 coding upstream 948889 554930 ~ 570129 (+)
LOC118941055 NA coding downstream 211716 1731224 ~ 1732090 (+)
tdrd3 LOC106592742 coding downstream 858425 2377933 ~ 2453770 (+)
LOC118941056 NA coding downstream 1694530 3214038 ~ 3214454 (+)
LOC118941057 NA coding downstream 1779933 3299441 ~ 3300228 (+)
LOC118941040 LOC106593609 coding downstream 3098580 4618088 ~ 4624857 (+)
G1509712 NA non-coding upstream 95707 1422778 ~ 1423311 (+)
G1509699 NA non-coding upstream 124415 1394109 ~ 1394603 (+)
G1509695 NA non-coding upstream 132303 1386033 ~ 1386715 (+)
G1509679 NA non-coding upstream 162619 1356060 ~ 1356399 (+)
G1509602 NA non-coding upstream 184101 1334176 ~ 1334917 (+)
G1509795 NA non-coding downstream 8643 1528151 ~ 1528384 (+)
G1509813 NA non-coding downstream 23714 1543222 ~ 1543424 (+)
G1509818 NA non-coding downstream 30552 1550060 ~ 1550266 (+)
G1509819 NA non-coding downstream 31498 1551006 ~ 1551282 (+)
G1509821 NA non-coding downstream 45584 1565092 ~ 1565317 (+)
G1509697 NA other upstream 129840 1388031 ~ 1389178 (+)
G1509212 NA other upstream 737815 780789 ~ 781203 (+)
G1509068 NA other upstream 911811 606622 ~ 607207 (+)
G1509015 NA other upstream 1074141 442803 ~ 444877 (+)
G1509914 NA other downstream 162784 1682292 ~ 1682858 (+)
G1510408 LOC106576654 other downstream 1014804 2534312 ~ 2534675 (+)
G1510524 LOC106597055 other downstream 1185334 2704842 ~ 2705497 (+)
G1510527 NA other downstream 1189205 2708713 ~ 2709747 (+)

Expression


Co-expression Network