G1510055


Basic Information

Item Value
gene id G1510055
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 2099071 ~ 2100017 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1727487
ACTCTCCACACCATACTAGAACCAGACAACATGTTAGATAGACTCTCCACACCATACTAGAACCAGACAACATGTTAGATAGACTCTCCAAACCATACTAGAACCAGACAACAGATCACATGTTAGATAGACTCTCCACACCATACTAGAACCAGACAACATGTTAGATAGACTCTCCAACCCATACTAGAACCAGACAACATGTTAGATAGACTCTCTACACCATACTAGAACCAGACAACAGATCACATGTTAGATAGACTCTCCACACCATACTAGAACCAGACAACATGTTAGATAGACTCTCCACACCATACTAGaaccagacaacagacaacatgttagatagactctccacaccatactagaaccagacaacagacaacatgttagATAGACTCTCCACACCATACTAGAACCAGACAACATGTTGGATAGACTCTCCACACCATACTAGAACCAGACAACAGATCACACGTTAGATAGACTCTAAACACCATACTAGAACCAGACATGTTAGATAGACTCTTCACACCATaaagataacacagccatcattaaaacacatggtttaacacagcagataacacagccatcattaaaactggaatgtaaagacatcgccacccacacaggtctactgtacggggtttaacacagcagataacacagtcatcattaaaactggaatgtaaagacatcgccacccacacaggtctactgtacggggtttaacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1727487 True 738 lncRNA 0.41 2 2099071 2100017

Neighbor

gene id symbol gene type direction distance location
LOC118941055 NA coding upstream 366981 1731224 ~ 1732090 (+)
LOC118941054 NA coding upstream 1239272 854370 ~ 859799 (+)
LOC110495331 LOC106593605 coding upstream 1306385 789678 ~ 792686 (+)
LOC118941073 LOC106575007 coding upstream 1314198 774850 ~ 784873 (+)
LOC110515393 LOC106575008 coding upstream 1477632 589742 ~ 621439 (+)
tdrd3 LOC106592742 coding downstream 277916 2377933 ~ 2453770 (+)
LOC118941056 NA coding downstream 1114021 3214038 ~ 3214454 (+)
LOC118941057 NA coding downstream 1199424 3299441 ~ 3300228 (+)
LOC118941040 LOC106593609 coding downstream 2518071 4618088 ~ 4624857 (+)
LOC110516278 LOC106600620 coding downstream 2554024 4654041 ~ 4748243 (+)
G1510049 NA non-coding upstream 36155 2062594 ~ 2062916 (+)
G1510047 NA non-coding upstream 41578 2056044 ~ 2057493 (+)
G1510035 NA non-coding upstream 96952 2000101 ~ 2002119 (+)
G1510027 NA non-coding upstream 119673 1978492 ~ 1979398 (+)
G1509992 NA non-coding upstream 210683 1887976 ~ 1888388 (+)
G1510059 NA non-coding downstream 23419 2123436 ~ 2123999 (+)
G1510073 NA non-coding downstream 52583 2152600 ~ 2154825 (+)
G1510111 NA non-coding downstream 176078 2276095 ~ 2340004 (+)
G1510130 NA non-coding downstream 236395 2336412 ~ 2336813 (+)
G1510138 NA non-coding downstream 262572 2362589 ~ 2364146 (+)
G1509914 NA other upstream 416213 1682292 ~ 1682858 (+)
G1509697 NA other upstream 709893 1388031 ~ 1389178 (+)
G1509212 NA other upstream 1317868 780789 ~ 781203 (+)
G1509068 NA other upstream 1491864 606622 ~ 607207 (+)
G1510408 LOC106576654 other downstream 434295 2534312 ~ 2534675 (+)
G1510524 LOC106597055 other downstream 604825 2704842 ~ 2705497 (+)
G1510527 NA other downstream 608696 2708713 ~ 2709747 (+)
G1510639 NA other downstream 772377 2872394 ~ 2874290 (+)

Expression


Co-expression Network