G1510111


Basic Information

Item Value
gene id G1510111
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 2276095 ~ 2340004 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1727557
agagagagagagagagagagagagagagagacagagagagagagagagacagagagagacagagagagacagagagagacagagagagagagagagagagagagagagagagagagagagagacagagagagacagagagagacagagagagacagagagagagagacagagagagacagagagagacagagagagagagagagagagagagagagacagagagagacagagagagagagagagacagagagacagagagagaaaagcgaCGCCTTCAAAGATGCTAACGAGCTAGCTAACTATCACGGTCGGATTGCCTTAATCCTATTTGTGGCTTTTCAGGTAGTTTGCCTTCCAAGACGTATAGAAAAGATAAACTACTGTTATCAACACGTTTTCTTGAATACTATTGTTGAAATATTTGCAAAACGATGTTGACAAAGTCAGTTAAGCTATCAGACAACGTTAAAGCGAGTTGATATTTTTACAGCTCAAACTTctgactgtaaaaaaaaaatgttcagtCCGAAAACCGCGCCACCAGAAGTTGTCAGTGTGACGTTGTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1727557 True 569 lncRNA 0.44 2 2276095 2340004

Neighbor

gene id symbol gene type direction distance location
LOC118941055 NA coding upstream 544005 1731224 ~ 1732090 (+)
LOC118941054 NA coding upstream 1416296 854370 ~ 859799 (+)
LOC110495331 LOC106593605 coding upstream 1483409 789678 ~ 792686 (+)
LOC118941073 LOC106575007 coding upstream 1491222 774850 ~ 784873 (+)
LOC110515393 LOC106575008 coding upstream 1654656 589742 ~ 621439 (+)
tdrd3 LOC106592742 coding downstream 37929 2377933 ~ 2453770 (+)
LOC118941056 NA coding downstream 874034 3214038 ~ 3214454 (+)
LOC118941057 NA coding downstream 959437 3299441 ~ 3300228 (+)
LOC118941040 LOC106593609 coding downstream 2278084 4618088 ~ 4624857 (+)
LOC110516278 LOC106600620 coding downstream 2314037 4654041 ~ 4748243 (+)
G1510073 NA non-coding upstream 121270 2152600 ~ 2154825 (+)
G1510059 NA non-coding upstream 152096 2123436 ~ 2123999 (+)
G1510055 NA non-coding upstream 176078 2099071 ~ 2100017 (+)
G1510049 NA non-coding upstream 213179 2062594 ~ 2062916 (+)
G1510047 NA non-coding upstream 218602 2056044 ~ 2057493 (+)
G1510138 NA non-coding downstream 22585 2362589 ~ 2364146 (+)
G1510139 NA non-coding downstream 25058 2365062 ~ 2365516 (+)
G1510143 NA non-coding downstream 41759 2381763 ~ 2382612 (+)
G1510146 NA non-coding downstream 45041 2385045 ~ 2385373 (+)
G1510154 NA non-coding downstream 68217 2408221 ~ 2409769 (+)
G1509914 NA other upstream 593237 1682292 ~ 1682858 (+)
G1509697 NA other upstream 886917 1388031 ~ 1389178 (+)
G1509212 NA other upstream 1494892 780789 ~ 781203 (+)
G1509068 NA other upstream 1668888 606622 ~ 607207 (+)
G1510408 LOC106576654 other downstream 194308 2534312 ~ 2534675 (+)
G1510524 LOC106597055 other downstream 364838 2704842 ~ 2705497 (+)
G1510527 NA other downstream 368709 2708713 ~ 2709747 (+)
G1510639 NA other downstream 532390 2872394 ~ 2874290 (+)

Expression


Co-expression Network