G1510154


Basic Information

Item Value
gene id G1510154
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 2408221 ~ 2409769 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1727607
gtcttctccctacaaggttcAGTTAGGAGTCCTGTCctttaccaatagtcttctccctacaaggtacagtcctgtcctctaccaatagtcttctccctacaaggtacagtcctgtcctctaccaatagtcttctccctacaaggttcagtcctgtcctttaccaatagtcttctccctacaaggtacagtcctgtcctctaccaatagtcttctccctacaaggttcAGTTAGGAtcctgtcctctaccaatagtcttctccctacaaggtacAGTTAGGAGTCCTGTCCtctaccaatagtcttctccctacaaggtacagtcctgtcctctaccaatagtattctccctacaaggtacagtcctgtcctctaccaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1727607 True 380 lncRNA 0.46 2 2408221 2409769

Neighbor

gene id symbol gene type direction distance location
LOC118941055 NA coding upstream 676131 1731224 ~ 1732090 (+)
LOC118941054 NA coding upstream 1548422 854370 ~ 859799 (+)
LOC110495331 LOC106593605 coding upstream 1615535 789678 ~ 792686 (+)
LOC118941073 LOC106575007 coding upstream 1623348 774850 ~ 784873 (+)
LOC110515393 LOC106575008 coding upstream 1786782 589742 ~ 621439 (+)
LOC118941056 NA coding downstream 804269 3214038 ~ 3214454 (+)
LOC118941057 NA coding downstream 889672 3299441 ~ 3300228 (+)
LOC118941040 LOC106593609 coding downstream 2208319 4618088 ~ 4624857 (+)
LOC110516278 LOC106600620 coding downstream 2244272 4654041 ~ 4748243 (+)
LOC110528775 LOC106575958 coding downstream 2470899 4880668 ~ 4933600 (+)
G1510146 NA non-coding upstream 22848 2385045 ~ 2385373 (+)
G1510143 NA non-coding upstream 25609 2381763 ~ 2382612 (+)
G1510139 NA non-coding upstream 42705 2365062 ~ 2365516 (+)
G1510138 NA non-coding upstream 44075 2362589 ~ 2364146 (+)
G1510111 NA non-coding upstream 68217 2276095 ~ 2340004 (+)
G1510396 NA non-coding downstream 94411 2504180 ~ 2504701 (+)
G1510400 NA non-coding downstream 108291 2518060 ~ 2518365 (+)
G1510403 NA non-coding downstream 115519 2525288 ~ 2552109 (+)
G1510414 NA non-coding downstream 131427 2541196 ~ 2542349 (+)
G1510419 NA non-coding downstream 138590 2548359 ~ 2549308 (+)
tdrd3 LOC106592742 other upstream 7294 2377933 ~ 2453770 (+)
G1509914 NA other upstream 725363 1682292 ~ 1682858 (+)
G1509697 NA other upstream 1019043 1388031 ~ 1389178 (+)
G1509212 NA other upstream 1627018 780789 ~ 781203 (+)
G1509068 NA other upstream 1801014 606622 ~ 607207 (+)
G1510408 LOC106576654 other downstream 124543 2534312 ~ 2534675 (+)
G1510524 LOC106597055 other downstream 295073 2704842 ~ 2705497 (+)
G1510527 NA other downstream 298944 2708713 ~ 2709747 (+)
G1510639 NA other downstream 462625 2872394 ~ 2874290 (+)
G1511398 NA other downstream 1871647 4281416 ~ 4284944 (+)

Expression


Co-expression Network