G1510396


Basic Information

Item Value
gene id G1510396
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 2504180 ~ 2504701 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1727939
GGAGATGGGACATTACTATAGGTCCAGGAGACATTACTATAGGTCCAGGAGACattactataggtccaggacattactataggtccaggagacattactataggtccaggagacattactataggtccaggagacattactataggtccaggacATTACTATAGGTCCAGGAGACATTACTATAGGTCCAGGACattactataggtccaggacATTACTATAGGTCCAGGAAGTGGGACATTACTATAGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1727939 True 251 lncRNA 0.43 2 2504180 2504701

Neighbor

gene id symbol gene type direction distance location
tdrd3 LOC106592742 coding upstream 50410 2377933 ~ 2453770 (+)
LOC118941055 NA coding upstream 772090 1731224 ~ 1732090 (+)
LOC118941054 NA coding upstream 1644381 854370 ~ 859799 (+)
LOC110495331 LOC106593605 coding upstream 1711494 789678 ~ 792686 (+)
LOC118941073 LOC106575007 coding upstream 1719307 774850 ~ 784873 (+)
LOC118941056 NA coding downstream 709337 3214038 ~ 3214454 (+)
LOC118941057 NA coding downstream 794740 3299441 ~ 3300228 (+)
LOC118941040 LOC106593609 coding downstream 2113387 4618088 ~ 4624857 (+)
LOC110516278 LOC106600620 coding downstream 2149340 4654041 ~ 4748243 (+)
LOC110528775 LOC106575958 coding downstream 2375967 4880668 ~ 4933600 (+)
G1510155 NA non-coding upstream 92510 2409062 ~ 2411670 (+)
G1510154 NA non-coding upstream 94411 2408221 ~ 2409769 (+)
G1510146 NA non-coding upstream 118807 2385045 ~ 2385373 (+)
G1510143 NA non-coding upstream 121568 2381763 ~ 2382612 (+)
G1510139 NA non-coding upstream 138664 2365062 ~ 2365516 (+)
G1510400 NA non-coding downstream 13359 2518060 ~ 2518365 (+)
G1510403 NA non-coding downstream 20587 2525288 ~ 2552109 (+)
G1510414 NA non-coding downstream 36495 2541196 ~ 2542349 (+)
G1510419 NA non-coding downstream 43658 2548359 ~ 2549308 (+)
G1510428 NA non-coding downstream 64973 2569674 ~ 2571934 (+)
G1509914 NA other upstream 821322 1682292 ~ 1682858 (+)
G1509697 NA other upstream 1115002 1388031 ~ 1389178 (+)
G1509212 NA other upstream 1722977 780789 ~ 781203 (+)
G1509068 NA other upstream 1896973 606622 ~ 607207 (+)
G1510408 LOC106576654 other downstream 29611 2534312 ~ 2534675 (+)
G1510524 LOC106597055 other downstream 200141 2704842 ~ 2705497 (+)
G1510527 NA other downstream 204012 2708713 ~ 2709747 (+)
G1510639 NA other downstream 367693 2872394 ~ 2874290 (+)
G1511398 NA other downstream 1776715 4281416 ~ 4284944 (+)

Expression


Co-expression Network