G1510400


Basic Information

Item Value
gene id G1510400
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 2518060 ~ 2518365 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1727944
GtcctaggctaggggttaggggttaaggttagggttaagagttaggttaaagggttaatggTAGGAATTAGGATTAgaaggaagggttagctaacatgtcctaggctaggggttaggggttaaggttagggttaagagttaggttaaagggttaatggTTAGGATTAGAAGGAAGggctagctaacatgctaagtcgttacaaagtagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1727944 True 209 lncRNA 0.43 2 2518060 2518365

Neighbor

gene id symbol gene type direction distance location
tdrd3 LOC106592742 coding upstream 64290 2377933 ~ 2453770 (+)
LOC118941055 NA coding upstream 785970 1731224 ~ 1732090 (+)
LOC118941054 NA coding upstream 1658261 854370 ~ 859799 (+)
LOC110495331 LOC106593605 coding upstream 1725374 789678 ~ 792686 (+)
LOC118941073 LOC106575007 coding upstream 1733187 774850 ~ 784873 (+)
LOC118941056 NA coding downstream 695673 3214038 ~ 3214454 (+)
LOC118941057 NA coding downstream 781076 3299441 ~ 3300228 (+)
LOC118941040 LOC106593609 coding downstream 2099723 4618088 ~ 4624857 (+)
LOC110516278 LOC106600620 coding downstream 2135676 4654041 ~ 4748243 (+)
LOC110528775 LOC106575958 coding downstream 2362303 4880668 ~ 4933600 (+)
G1510396 NA non-coding upstream 13359 2504180 ~ 2504701 (+)
G1510155 NA non-coding upstream 106390 2409062 ~ 2411670 (+)
G1510154 NA non-coding upstream 108291 2408221 ~ 2409769 (+)
G1510146 NA non-coding upstream 132687 2385045 ~ 2385373 (+)
G1510143 NA non-coding upstream 135448 2381763 ~ 2382612 (+)
G1510403 NA non-coding downstream 6923 2525288 ~ 2552109 (+)
G1510414 NA non-coding downstream 22831 2541196 ~ 2542349 (+)
G1510419 NA non-coding downstream 29994 2548359 ~ 2549308 (+)
G1510428 NA non-coding downstream 51309 2569674 ~ 2571934 (+)
G1510501 NA non-coding downstream 145104 2663469 ~ 2663938 (+)
G1509914 NA other upstream 835202 1682292 ~ 1682858 (+)
G1509697 NA other upstream 1128882 1388031 ~ 1389178 (+)
G1509212 NA other upstream 1736857 780789 ~ 781203 (+)
G1509068 NA other upstream 1910853 606622 ~ 607207 (+)
G1510408 LOC106576654 other downstream 15947 2534312 ~ 2534675 (+)
G1510524 LOC106597055 other downstream 186477 2704842 ~ 2705497 (+)
G1510527 NA other downstream 190348 2708713 ~ 2709747 (+)
G1510639 NA other downstream 354029 2872394 ~ 2874290 (+)
G1511398 NA other downstream 1763051 4281416 ~ 4284944 (+)

Expression


Co-expression Network