G1510428


Basic Information

Item Value
gene id G1510428
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 2569674 ~ 2571934 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1727977
tcttcttctctcattggggtgtctcttgtctgatgttctcttcttcttctctcattggggtatctcttgtctgatgttctcttcttcttctctcattggggtgtctcttgtttgatgttctcttcttctctcattggggtgtctcttgtctgatgttctcttcttcttctctcattggggtatctcttgtctgatgttctcttcttctctcattggggtgtctcttgtctgatgttctcttcttctctcattggggtgtctcttgtctgatgttctcttcttctctcattggggtgtctcttgtctgatgttctcttcttctctcattggggtgtctcttgtctgatgttgtcttcttcttctctcattggggtatctcttgtctgatgttctcttcttcttctctcattggggtatctcttgtctgatgttctcttcttcttctctcattggggtgtctcttgtctgatgttctcttcttctctcattggggtgtctcttgtctgatgttctcttcttcttctctcattggggtgtctcttgtctgatgttctcttcttcttctctcattggggtgtctcttgtctgatgttctcttcttcttctctcattggggtgtctcttgtctgatgttctcttcttctctcattggggtgtctcttgtctgatgttctcttcttcttctctcattggggtatctcttgtctgatgttctcttcttcttctctcattggggtgtctcttgtctgatgttctcttcttcttctctcattggggtatctcttgtctgatgttctcttcttctctcattggggtgtctcttgtctgatgttctcttcttcttctctcattggggtgtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1727977 True 860 lncRNA 0.43 3 2569674 2571934

Neighbor

gene id symbol gene type direction distance location
tdrd3 LOC106592742 coding upstream 115904 2377933 ~ 2453770 (+)
LOC118941055 NA coding upstream 837584 1731224 ~ 1732090 (+)
LOC118941054 NA coding upstream 1709875 854370 ~ 859799 (+)
LOC110495331 LOC106593605 coding upstream 1776988 789678 ~ 792686 (+)
LOC118941073 LOC106575007 coding upstream 1784801 774850 ~ 784873 (+)
LOC118941056 NA coding downstream 642104 3214038 ~ 3214454 (+)
LOC118941057 NA coding downstream 727507 3299441 ~ 3300228 (+)
LOC118941040 LOC106593609 coding downstream 2046154 4618088 ~ 4624857 (+)
LOC110516278 LOC106600620 coding downstream 2082107 4654041 ~ 4748243 (+)
LOC110528775 LOC106575958 coding downstream 2308734 4880668 ~ 4933600 (+)
G1510403 NA non-coding upstream 17565 2525288 ~ 2552109 (+)
G1510419 NA non-coding upstream 20366 2548359 ~ 2549308 (+)
G1510414 NA non-coding upstream 27325 2541196 ~ 2542349 (+)
G1510400 NA non-coding upstream 51309 2518060 ~ 2518365 (+)
G1510396 NA non-coding upstream 64973 2504180 ~ 2504701 (+)
G1510501 NA non-coding downstream 91535 2663469 ~ 2663938 (+)
G1510526 NA non-coding downstream 136220 2708154 ~ 2708372 (+)
G1510538 NA non-coding downstream 165750 2737684 ~ 2738258 (+)
G1510547 NA non-coding downstream 199076 2771010 ~ 2771728 (+)
G1510621 NA non-coding downstream 282551 2854485 ~ 2854771 (+)
G1510408 LOC106576654 other upstream 34999 2534312 ~ 2534675 (+)
G1509914 NA other upstream 886816 1682292 ~ 1682858 (+)
G1509697 NA other upstream 1180496 1388031 ~ 1389178 (+)
G1509212 NA other upstream 1788471 780789 ~ 781203 (+)
G1510524 LOC106597055 other downstream 132908 2704842 ~ 2705497 (+)
G1510527 NA other downstream 136779 2708713 ~ 2709747 (+)
G1510639 NA other downstream 300460 2872394 ~ 2874290 (+)
G1511398 NA other downstream 1709482 4281416 ~ 4284944 (+)
G1512020 NA other downstream 2038084 4610018 ~ 4617952 (+)

Expression


Co-expression Network