G1511220


Basic Information

Item Value
gene id G1511220
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 3827561 ~ 3827919 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1728982
cacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacatacacacacacacacacacacacacacacacacacacacacacagccacacacacacacacacacacacacacacacacacacacacacatgcacgcacacacacacacacacacacacacagtaagatatatatacacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagccacacacacacacacacacacacacacacacacacacacacacacacacacacacatgcacgcacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1728982 True 359 lncRNA 0.50 1 3827561 3827919

Neighbor

gene id symbol gene type direction distance location
LOC118941057 NA coding upstream 527333 3299441 ~ 3300228 (+)
LOC118941056 NA coding upstream 613107 3214038 ~ 3214454 (+)
tdrd3 LOC106592742 coding upstream 1373791 2377933 ~ 2453770 (+)
LOC118941055 NA coding upstream 2095471 1731224 ~ 1732090 (+)
LOC118941054 NA coding upstream 2967762 854370 ~ 859799 (+)
LOC118941040 LOC106593609 coding downstream 790169 4618088 ~ 4624857 (+)
LOC110516278 LOC106600620 coding downstream 826122 4654041 ~ 4748243 (+)
LOC110528775 LOC106575958 coding downstream 1052749 4880668 ~ 4933600 (+)
LOC110495595 LOC106574881 coding downstream 1067995 4895914 ~ 5043592 (+)
LOC118941222 NA coding downstream 1156041 4944941 ~ 5000801 (+)
G1511175 pcdh9 non-coding upstream 4353 3745782 ~ 3823208 (+)
G1511217 NA non-coding upstream 6641 3820218 ~ 3820920 (+)
G1511211 NA non-coding upstream 28051 3798099 ~ 3799510 (+)
G1511192 NA non-coding upstream 105130 3720140 ~ 3722431 (+)
G1511191 NA non-coding upstream 111819 3715266 ~ 3715742 (+)
G1511221 NA non-coding downstream 677 3828596 ~ 3832354 (+)
G1511233 NA non-coding downstream 37155 3865074 ~ 3865297 (+)
G1511237 NA non-coding downstream 42099 3870018 ~ 3870250 (+)
G1511256 NA non-coding downstream 67240 3895159 ~ 3895509 (+)
G1511259 NA non-coding downstream 80183 3908102 ~ 3908390 (+)
G1510639 NA other upstream 953395 2872394 ~ 2874290 (+)
G1510527 NA other upstream 1117814 2708713 ~ 2709747 (+)
G1510524 LOC106597055 other upstream 1122064 2704842 ~ 2705497 (+)
G1510408 LOC106576654 other upstream 1292886 2534312 ~ 2534675 (+)
G1511398 NA other downstream 453497 4281416 ~ 4284944 (+)
G1512020 NA other downstream 782099 4610018 ~ 4617952 (+)
G1512113 NA other downstream 1038076 4865995 ~ 4868008 (+)
G1512182 NA other downstream 1276168 5104087 ~ 5106088 (+)

Expression


Co-expression Network