G1511278


Basic Information

Item Value
gene id G1511278
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 3969133 ~ 3969457 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1729053
CTCAATATGGCCGTCGGAGCTACAGTCAAGTAGGTAGTACCATCAACCATACTCTGTGTTGGGAGCTACAGTCAAGTAGGTAGTAACATCAACCATACTCTGTGTTGGGAGCTACAGTCAAGTAGGTAGTAACATCAACCATACTCTGTGTTGGGAGCTACAGTCAAGTAGGTAGTAACATCAACCATACTCTGTGTTGGGAGCTACAGTCAAGTAGGTAAACTGTTTatctgttcctcttcctgttcctcttcctgttcctcttcctgttcctcttcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1729053 True 279 lncRNA 0.45 2 3969133 3969457

Neighbor

gene id symbol gene type direction distance location
LOC118941057 NA coding upstream 668905 3299441 ~ 3300228 (+)
LOC118941056 NA coding upstream 754679 3214038 ~ 3214454 (+)
tdrd3 LOC106592742 coding upstream 1515363 2377933 ~ 2453770 (+)
LOC118941055 NA coding upstream 2237043 1731224 ~ 1732090 (+)
LOC118941054 NA coding upstream 3109334 854370 ~ 859799 (+)
LOC118941040 LOC106593609 coding downstream 648631 4618088 ~ 4624857 (+)
LOC110516278 LOC106600620 coding downstream 684584 4654041 ~ 4748243 (+)
LOC110528775 LOC106575958 coding downstream 911211 4880668 ~ 4933600 (+)
LOC110495595 LOC106574881 coding downstream 926457 4895914 ~ 5043592 (+)
LOC118941222 NA coding downstream 1014503 4944941 ~ 5000801 (+)
G1511275 NA non-coding upstream 2787 3965285 ~ 3966346 (+)
G1511259 NA non-coding upstream 60743 3908102 ~ 3908390 (+)
G1511256 NA non-coding upstream 73624 3895159 ~ 3895509 (+)
G1511237 NA non-coding upstream 98883 3870018 ~ 3870250 (+)
G1511233 NA non-coding upstream 103836 3865074 ~ 3865297 (+)
G1511286 NA non-coding downstream 24878 3994335 ~ 3994755 (+)
G1511293 NA non-coding downstream 55252 4024709 ~ 4025748 (+)
G1511329 NA non-coding downstream 142839 4112296 ~ 4112950 (+)
G1511330 NA non-coding downstream 145195 4114652 ~ 4115077 (+)
G1511334 NA non-coding downstream 152427 4121884 ~ 4122319 (+)
G1510639 NA other upstream 1094967 2872394 ~ 2874290 (+)
G1510527 NA other upstream 1259386 2708713 ~ 2709747 (+)
G1510524 LOC106597055 other upstream 1263636 2704842 ~ 2705497 (+)
G1510408 LOC106576654 other upstream 1434458 2534312 ~ 2534675 (+)
G1511398 NA other downstream 311959 4281416 ~ 4284944 (+)
G1512020 NA other downstream 640561 4610018 ~ 4617952 (+)
G1512113 NA other downstream 896538 4865995 ~ 4868008 (+)
G1512182 NA other downstream 1134630 5104087 ~ 5106088 (+)

Expression


Co-expression Network