G1511334


Basic Information

Item Value
gene id G1511334
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 4121884 ~ 4122319 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1729111
AGAGGTTTGGGAGGGAGGACAGACAGCACAGAGGTTTGGGAGGGAGGACAGACAGCACAGAGGTTTGGGAGGGAGGACAGACAGCACAGAGGTTCAGGAAGgaggacagacaacacagagattcaggaaggaggacagacagcacagaggttcaggaaggaggacagacaacacagaggttcaggaaggaggacagacagcacagaggttcaggaaggaggacagacagcacagaggttcaggaaggaggacagacaacacagaggtTCAGGAAGGAGGACAGACAACACACAGGTTCAGGAGGGAGGACAGACAGCACAACACAGAGGTTCAGGAAGGAGGACAGACAACACACAGGttccaaaatggagatgtttt
>TU1729113
AGAGGTTTGGGAGGGAGGACAGACAGCACAGAGGTTTGGGAGGGAGGACAGACAGCACAGAGGTTTGGGAGGGAGGACAGACAGCACAGAGGTTCAGGAAGgaggacagacaacacagagattcaggaaggaggacagacagcacagaggttcaggaaggaggacagacaacacagaggttcaggaaggaggacagacagcacagaggttcaggaaggaggacagacaacacagaggttcaggaaggaggacagacagcacagaggttcaggaaggaggacagacaacacagaggtTCAGGAAGGAGGACAGACACAGAGGTTCAGGAAGGAGGACAGACAACACACAGGttccaaaatggagatgtttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1729111 False 378 lncRNA 0.53 2 4121884 4122319
TU1729113 True 370 lncRNA 0.53 3 4121884 4122319

Neighbor

gene id symbol gene type direction distance location
LOC118941057 NA coding upstream 821656 3299441 ~ 3300228 (+)
LOC118941056 NA coding upstream 907430 3214038 ~ 3214454 (+)
tdrd3 LOC106592742 coding upstream 1668114 2377933 ~ 2453770 (+)
LOC118941055 NA coding upstream 2389794 1731224 ~ 1732090 (+)
LOC118941054 NA coding upstream 3262085 854370 ~ 859799 (+)
LOC118941040 LOC106593609 coding downstream 495769 4618088 ~ 4624857 (+)
LOC110516278 LOC106600620 coding downstream 531722 4654041 ~ 4748243 (+)
LOC110528775 LOC106575958 coding downstream 758349 4880668 ~ 4933600 (+)
LOC110495595 LOC106574881 coding downstream 773595 4895914 ~ 5043592 (+)
LOC118941222 NA coding downstream 861641 4944941 ~ 5000801 (+)
G1511330 NA non-coding upstream 6807 4114652 ~ 4115077 (+)
G1511329 NA non-coding upstream 8934 4112296 ~ 4112950 (+)
G1511293 NA non-coding upstream 96136 4024709 ~ 4025748 (+)
G1511286 NA non-coding upstream 127129 3994335 ~ 3994755 (+)
G1511278 NA non-coding upstream 152427 3969133 ~ 3969457 (+)
G1511338 NA non-coding downstream 9042 4131361 ~ 4131810 (+)
G1511342 NA non-coding downstream 18695 4141014 ~ 4141736 (+)
G1511343 NA non-coding downstream 20551 4142870 ~ 4143201 (+)
G1511347 NA non-coding downstream 26508 4148827 ~ 4149182 (+)
G1511364 NA non-coding downstream 63632 4185951 ~ 4187964 (+)
G1510639 NA other upstream 1247718 2872394 ~ 2874290 (+)
G1510527 NA other upstream 1412137 2708713 ~ 2709747 (+)
G1510524 LOC106597055 other upstream 1416387 2704842 ~ 2705497 (+)
G1510408 LOC106576654 other upstream 1587209 2534312 ~ 2534675 (+)
G1511398 NA other downstream 159097 4281416 ~ 4284944 (+)
G1512020 NA other downstream 487699 4610018 ~ 4617952 (+)
G1512113 NA other downstream 743676 4865995 ~ 4868008 (+)
G1512182 NA other downstream 981768 5104087 ~ 5106088 (+)

Expression


Co-expression Network