G1511342


Basic Information

Item Value
gene id G1511342
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 4141014 ~ 4141736 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1729127
GGATAATGCATCACTATGAAGGTACAGATAATGCATCACTATGAAGGTATGGCTAATGCATCACTATGAAGGTACGGGATAATGCATCACTATGAAGGTATGGCTAATGCATCACTATGAAGGTACGGGATAATGCATCACTATGAAGGTACGGATAATGCATCACTATGATGGTACGGATAATGCATCACTATGAAGGTACGGATAATGCATCACTATGAAGTTATGGGATAATGCATCACTATGAAGGTTTGGATAATGCATCACTATGAAGGTATGGATAATGCATCACTATGAAGGTACGGGATAATGCATCACTATGAATGTATGG
>TU1729130
GGATAATGCATCACTATGAAGGTACAGATAATGCATCACTATGAAGGTATGGCTAATGCATCACTATGAAGGTATGGCTAATGCATCACTATGAAGGTACGGGATAATGCATCACTATGAAGGTACGGATAATGCATCACTATGAAGGTACGGGATAATGCATCACTATGAAGGTACGGGATAATGCATCACTATGAAGGTACGGATAATGCATCACTATGAAGGTATGGGATAATGCACCACTATGAAGGTATGGGATAATGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1729127 False 331 lncRNA 0.39 3 4141014 4141522
TU1729130 True 264 lncRNA 0.41 4 4141014 4141736

Neighbor

gene id symbol gene type direction distance location
LOC118941057 NA coding upstream 840786 3299441 ~ 3300228 (+)
LOC118941056 NA coding upstream 926560 3214038 ~ 3214454 (+)
tdrd3 LOC106592742 coding upstream 1687244 2377933 ~ 2453770 (+)
LOC118941055 NA coding upstream 2408924 1731224 ~ 1732090 (+)
LOC118941054 NA coding upstream 3281215 854370 ~ 859799 (+)
LOC118941040 LOC106593609 coding downstream 476352 4618088 ~ 4624857 (+)
LOC110516278 LOC106600620 coding downstream 512305 4654041 ~ 4748243 (+)
LOC110528775 LOC106575958 coding downstream 738932 4880668 ~ 4933600 (+)
LOC110495595 LOC106574881 coding downstream 754178 4895914 ~ 5043592 (+)
LOC118941222 NA coding downstream 842224 4944941 ~ 5000801 (+)
G1511338 NA non-coding upstream 9204 4131361 ~ 4131810 (+)
G1511334 NA non-coding upstream 18695 4121884 ~ 4122319 (+)
G1511330 NA non-coding upstream 25937 4114652 ~ 4115077 (+)
G1511329 NA non-coding upstream 28064 4112296 ~ 4112950 (+)
G1511293 NA non-coding upstream 115266 4024709 ~ 4025748 (+)
G1511343 NA non-coding downstream 1134 4142870 ~ 4143201 (+)
G1511347 NA non-coding downstream 7091 4148827 ~ 4149182 (+)
G1511364 NA non-coding downstream 44215 4185951 ~ 4187964 (+)
G1511371 NA non-coding downstream 69810 4211546 ~ 4214904 (+)
G1511372 NA non-coding downstream 69955 4211691 ~ 4212864 (+)
G1510639 NA other upstream 1266848 2872394 ~ 2874290 (+)
G1510527 NA other upstream 1431267 2708713 ~ 2709747 (+)
G1510524 LOC106597055 other upstream 1435517 2704842 ~ 2705497 (+)
G1510408 LOC106576654 other upstream 1606339 2534312 ~ 2534675 (+)
G1511398 NA other downstream 139680 4281416 ~ 4284944 (+)
G1512020 NA other downstream 468282 4610018 ~ 4617952 (+)
G1512113 NA other downstream 724259 4865995 ~ 4868008 (+)
G1512182 NA other downstream 962351 5104087 ~ 5106088 (+)

Expression


Co-expression Network