G1511372


Basic Information

Item Value
gene id G1511372
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 4211691 ~ 4212864 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1729169
gtagaggtgtggtagagtataggagagagtagaggtgtggtacagtagaggtgtggtagagtagaggtgtggtagaggtgtggtagagtagaggtgtggtagagtagaggtgtggtagaggtgtggtagagtagaggtgtggtagaatagaggtgtggtagagatgtggtagagtagaggtgtggtagaatagaggtgtggtagaggtgtggtagagtagaggtgtggtagaggtgtggtagagtagaggtgtggtagaggtgtggtagaatagaggtgtggtagaggtgtggtagaatagaggtgtggtagagtagaggtgtggtagag

Function

NR:

description
PREDICTED: uncharacterized protein LOC106586928

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1729169 True 330 lncRNA 0.49 2 4211691 4212864

Neighbor

gene id symbol gene type direction distance location
LOC118941057 NA coding upstream 911463 3299441 ~ 3300228 (+)
LOC118941056 NA coding upstream 997237 3214038 ~ 3214454 (+)
tdrd3 LOC106592742 coding upstream 1757921 2377933 ~ 2453770 (+)
LOC118941055 NA coding upstream 2479601 1731224 ~ 1732090 (+)
LOC118941054 NA coding upstream 3351892 854370 ~ 859799 (+)
LOC118941040 LOC106593609 coding downstream 405224 4618088 ~ 4624857 (+)
LOC110516278 LOC106600620 coding downstream 441177 4654041 ~ 4748243 (+)
LOC110528775 LOC106575958 coding downstream 667804 4880668 ~ 4933600 (+)
LOC110495595 LOC106574881 coding downstream 683050 4895914 ~ 5043592 (+)
LOC118941222 NA coding downstream 771096 4944941 ~ 5000801 (+)
G1511364 NA non-coding upstream 23727 4185951 ~ 4187964 (+)
G1511347 NA non-coding upstream 62509 4148827 ~ 4149182 (+)
G1511343 NA non-coding upstream 68490 4142870 ~ 4143201 (+)
G1511342 NA non-coding upstream 69955 4141014 ~ 4141736 (+)
G1511338 NA non-coding upstream 79881 4131361 ~ 4131810 (+)
G1511394 NA non-coding downstream 63397 4276261 ~ 4277973 (+)
G1511396 NA non-coding downstream 65951 4278815 ~ 4279083 (+)
G1511397 NA non-coding downstream 66281 4279145 ~ 4280525 (+)
G1511406 NA non-coding downstream 84272 4297136 ~ 4297835 (+)
G1511409 NA non-coding downstream 89817 4302681 ~ 4303054 (+)
G1510639 NA other upstream 1337525 2872394 ~ 2874290 (+)
G1510527 NA other upstream 1501944 2708713 ~ 2709747 (+)
G1510524 LOC106597055 other upstream 1506194 2704842 ~ 2705497 (+)
G1510408 LOC106576654 other upstream 1677016 2534312 ~ 2534675 (+)
G1511398 NA other downstream 68552 4281416 ~ 4284944 (+)
G1512020 NA other downstream 397154 4610018 ~ 4617952 (+)
G1512113 NA other downstream 653131 4865995 ~ 4868008 (+)
G1512182 NA other downstream 891223 5104087 ~ 5106088 (+)

Expression


Co-expression Network