G1511398


Basic Information

Item Value
gene id G1511398
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 4281416 ~ 4284944 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1729203
GACCGAAAGGTCCTGAAGCTATAAAGCAGATGATTTGTCAGCATGTACAAGTCCCTAACAGTCTCCACCTGCTCCAGTGATACAGTACAACAGGCCTCTACACTACAGCAGACAGCAGTCTCCATCTGCTCCAGTGATACAGTACAACAGGCCTCTACACTACAGCAGACAGCAGTCTCCATCTGCTCCAGAGATACAGTACAACAGGCCTACACTACAACAGACAGCAGTCTCCATCTGCTCCAGTGATACAGTACAACAGGCCTCTACACTACAGCAGTCATGACACAGCAGTCTCCATCTGCTCCAGCGATACAGTACAACAGGCCTACACTACAGCAGTCATGACACAGCAGTTTGCATTGAACAGGATCTGCTTCAGAGACACAAGTGAAACGTTTTGGTTGTTTAAAACTAAGTTGTTAAACTACAGTATCTCCTCTTTACAGAAAGCTATCACTCCAGTACATCGTTCACTCATACAGCAGATTAACTCAATCAGACAAATGTTTATTATCGTTTCATGTCCTAAAACGTCCTTGAAAAGCCAGCCCTTACTGTACATACAGGAAACATGATGTCTGCCagcagtcagtcaggcagtcacccagtcaggcagtcagtcaggcagtcacccagtcaggcagtcaggcagtcaggcagtcacccagtcaggcagtcacccagtcaggcagtcaggcaggcaggcagtcaggcagtcaccCAGTCAGGAAGTCACCCAGTCAGGCAGTCACCGAGTCAGGAAGTCACCCAGTCAGGCAGTCACCCAGTCAGGCAGTCACCCAGTCAGGCAGTCACCCAGTCAGGCAGGCTGGCAGTCAGGCAGTCACCCAGTCAGGCAGTCacccagtcaggcagtcaggcaggcaggcagtcaggcagtcacccagtcaggaagtcacccagtcaggcagtcaggcagtcaggcagtcacccagtcaggcagtcacccagtcaggcagtcaggcaggcaggcagtcaggcagtcaccCAGTCAGGAAGTCACCCAGTCAGGCAGTCACCGAGTCAGGAAGTCACCCAGTCAGGCAGTCACCCAGTCAGGCAGTCACCCAGTCAGGCAGGCTGGCAGTCAGGCAGTCACCCAGTCAGGCATTCAGGCTGGCAGGCAGTCacccagtcaggcagtcaggcagtcacccagtcaggcagtcaggcagtcacccagtcaggcagtcacccagtcaggcagtctggcagtcaggcagtcacccagtcacccagtcaggcagtcaggcagtcaggcagtcaggcagtcacccagtcaggcagtcaggcagtcacccagtcaggcagtcaggcagtcacccagtcacccagtcaggcaTTCAGGCAGTCAAGTAGTCacccagtcaggcagtcaggcagtcacccagtcaggcagtcaggcagtcacccagtcaggcagtcaggcagtcaggcagtcacccagtcaggcagtcacccagtcacccagtcaggcagtcaggcagtcacccagtcaggcagtcaggcagtcacccagtcacccagtcaggcagtcaggcagtcacccagtcaggcagtcaggcagtcacccagtcaggcagtcaggcagtcacccagtcaggcagtcaggcagtcaggcagtcacccagtcaggcagtcaggcagtcacccagtcaggcagtcaggcagtcacccagtcaggcagtcacccagtcacccagtcacccagtcaggcagtcacccagtcacccagtcacccagtcaggcagtcacccagtcaggcagtcaggcagtcagaaGTAATGTGGATGAAGAATGTAAAGATATAACAGGCTACCAGATtgagcctctcctctcctctcctctcctctct

Function

NR:

description
antimicrobial peptides-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1729203 True 1879 TUCP 0.56 5 4281416 4284944

Neighbor

gene id symbol gene type direction distance location
LOC118941057 NA coding upstream 981188 3299441 ~ 3300228 (+)
LOC118941056 NA coding upstream 1066962 3214038 ~ 3214454 (+)
tdrd3 LOC106592742 coding upstream 1827646 2377933 ~ 2453770 (+)
LOC118941055 NA coding upstream 2549326 1731224 ~ 1732090 (+)
LOC118941054 NA coding upstream 3421617 854370 ~ 859799 (+)
LOC118941040 LOC106593609 coding downstream 333144 4618088 ~ 4624857 (+)
LOC110516278 LOC106600620 coding downstream 369097 4654041 ~ 4748243 (+)
LOC110528775 LOC106575958 coding downstream 595724 4880668 ~ 4933600 (+)
LOC110495595 LOC106574881 coding downstream 610970 4895914 ~ 5043592 (+)
LOC118941222 NA coding downstream 699016 4944941 ~ 5000801 (+)
G1511397 NA non-coding upstream 891 4279145 ~ 4280525 (+)
G1511396 NA non-coding upstream 2333 4278815 ~ 4279083 (+)
G1511394 NA non-coding upstream 3443 4276261 ~ 4277973 (+)
G1511371 NA non-coding upstream 66512 4211546 ~ 4214904 (+)
G1511372 NA non-coding upstream 68552 4211691 ~ 4212864 (+)
G1511406 NA non-coding downstream 12192 4297136 ~ 4297835 (+)
G1511409 NA non-coding downstream 17737 4302681 ~ 4303054 (+)
G1511410 NA non-coding downstream 22505 4307449 ~ 4319070 (+)
G1511415 NA non-coding downstream 31086 4316030 ~ 4316467 (+)
G1511416 NA non-coding downstream 32368 4317312 ~ 4318205 (+)
G1510639 NA other upstream 1407250 2872394 ~ 2874290 (+)
G1510527 NA other upstream 1571669 2708713 ~ 2709747 (+)
G1510524 LOC106597055 other upstream 1575919 2704842 ~ 2705497 (+)
G1510408 LOC106576654 other upstream 1746741 2534312 ~ 2534675 (+)
G1512020 NA other downstream 325074 4610018 ~ 4617952 (+)
G1512113 NA other downstream 581051 4865995 ~ 4868008 (+)
G1512182 NA other downstream 819143 5104087 ~ 5106088 (+)
G1512205 NA other downstream 957790 5242734 ~ 5243427 (+)

Expression


Co-expression Network