G1511422


Basic Information

Item Value
gene id G1511422
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 4342002 ~ 4343190 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1729239
CAATATCTGTCTCTATGTCCCTGTCTTCTATTCCATAGGTGTAGTGATGTCTATTCaatatctgtctctatgtctctgtcttctattCCATAGGTGTAGTGATGTCTATTCAATATCTGTCTCTATGTCCCTGTCTCCTATTCCATAGGTGATATTAGTAGTGATGTCTATTCaatatctgtctctatgtctctgtctcctatTCCATAGGTGTAGTGATGTCTATTCAATATCTGTCTCTATGTCCCTGTCTTCTATTCCATAGGTGATATTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1729239 True 275 lncRNA 0.37 4 4342002 4343190

Neighbor

gene id symbol gene type direction distance location
LOC118941057 NA coding upstream 1041774 3299441 ~ 3300228 (+)
LOC118941056 NA coding upstream 1127548 3214038 ~ 3214454 (+)
tdrd3 LOC106592742 coding upstream 1888232 2377933 ~ 2453770 (+)
LOC118941055 NA coding upstream 2609912 1731224 ~ 1732090 (+)
LOC118941054 NA coding upstream 3482203 854370 ~ 859799 (+)
LOC118941040 LOC106593609 coding downstream 274898 4618088 ~ 4624857 (+)
LOC110516278 LOC106600620 coding downstream 310851 4654041 ~ 4748243 (+)
LOC110528775 LOC106575958 coding downstream 537478 4880668 ~ 4933600 (+)
LOC110495595 LOC106574881 coding downstream 552724 4895914 ~ 5043592 (+)
LOC118941222 NA coding downstream 640770 4944941 ~ 5000801 (+)
G1511410 NA non-coding upstream 22932 4307449 ~ 4319070 (+)
G1511416 NA non-coding upstream 23797 4317312 ~ 4318205 (+)
G1511415 NA non-coding upstream 25535 4316030 ~ 4316467 (+)
G1511409 NA non-coding upstream 38948 4302681 ~ 4303054 (+)
G1511406 NA non-coding upstream 44167 4297136 ~ 4297835 (+)
G1511423 NA non-coding downstream 832 4344022 ~ 4344620 (+)
G1511429 NA non-coding downstream 37792 4380982 ~ 4383601 (+)
G1511430 NA non-coding downstream 42126 4385316 ~ 4385930 (+)
G1511433 NA non-coding downstream 49424 4392614 ~ 4393153 (+)
G1511437 NA non-coding downstream 60374 4403564 ~ 4404378 (+)
G1511398 NA other upstream 57058 4281416 ~ 4284944 (+)
G1510639 NA other upstream 1467836 2872394 ~ 2874290 (+)
G1510527 NA other upstream 1632255 2708713 ~ 2709747 (+)
G1510524 LOC106597055 other upstream 1636505 2704842 ~ 2705497 (+)
G1510408 LOC106576654 other upstream 1807327 2534312 ~ 2534675 (+)
G1512020 NA other downstream 266828 4610018 ~ 4617952 (+)
G1512113 NA other downstream 522805 4865995 ~ 4868008 (+)
G1512182 NA other downstream 760897 5104087 ~ 5106088 (+)
G1512205 NA other downstream 899544 5242734 ~ 5243427 (+)

Expression


Co-expression Network