G1511461


Basic Information

Item Value
gene id G1511461
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 4461143 ~ 4461774 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1729298
acctgagccctaggaccatgccccaggactacctgacatgatgactccttgctgtccccagtccacctggctgtgctgctgctccagtttcaactgttctgccttaatattattcgaccatgctggtcatttatgaacatttgaacatcttggccatgttctgttatctccacccggcacagccagaagaggactggccatcccacatatgctctctctaattctctctttctttctctctctcggaggacctgagccctaggaccatgccccaggaatacctgacatgatgactccttgctgtccccagtccacctgactgtgctgctgctccagtttcaactgttctgccttattattattcaaccatgctggtcatttat
>TU1729299
acctgagccctaggaccatgccccaggactacctgacatgatgactccttgctgtccccagtccacctggctgtgctgctgctccagtttcaactgttctgccttaatattattcgaccatgctggtcatttatgaacatttgaacatcttggccatgttctgttatctccacccggcacagccagaagaggactggccatcccacatatgctctctctaattctctctttctttctctctctcggaggacctgagccctaggaccatgccccaggaatacctgacatgatgactccttgctgtacccagtccacctgactgtgctgctgctccagtttcaactgttctgccttattattattcaaccatgctggtcatttat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1729298 False 383 lncRNA 0.50 2 4461143 4461774
TU1729299 True 383 lncRNA 0.50 2 4461143 4461774

Neighbor

gene id symbol gene type direction distance location
LOC118941057 NA coding upstream 1160915 3299441 ~ 3300228 (+)
LOC118941056 NA coding upstream 1246689 3214038 ~ 3214454 (+)
tdrd3 LOC106592742 coding upstream 2007373 2377933 ~ 2453770 (+)
LOC118941055 NA coding upstream 2729053 1731224 ~ 1732090 (+)
LOC118941054 NA coding upstream 3601344 854370 ~ 859799 (+)
LOC118941040 LOC106593609 coding downstream 156314 4618088 ~ 4624857 (+)
LOC110516278 LOC106600620 coding downstream 192267 4654041 ~ 4748243 (+)
LOC110528775 LOC106575958 coding downstream 418894 4880668 ~ 4933600 (+)
LOC110495595 LOC106574881 coding downstream 434140 4895914 ~ 5043592 (+)
LOC118941222 NA coding downstream 522186 4944941 ~ 5000801 (+)
G1511458 NA non-coding upstream 9194 4451379 ~ 4451949 (+)
G1511437 NA non-coding upstream 56765 4403564 ~ 4404378 (+)
G1511433 NA non-coding upstream 67990 4392614 ~ 4393153 (+)
G1511430 NA non-coding upstream 75213 4385316 ~ 4385930 (+)
G1511429 NA non-coding upstream 77542 4380982 ~ 4383601 (+)
G1511471 NA non-coding downstream 25204 4486978 ~ 4491914 (+)
G1511846 NA non-coding downstream 41873 4503647 ~ 4503847 (+)
G1511853 NA non-coding downstream 50577 4512351 ~ 4513999 (+)
G1511855 NA non-coding downstream 52636 4514410 ~ 4516387 (+)
G1511871 NA non-coding downstream 99799 4561573 ~ 4564497 (+)
G1511398 NA other upstream 176199 4281416 ~ 4284944 (+)
G1510639 NA other upstream 1586977 2872394 ~ 2874290 (+)
G1510527 NA other upstream 1751396 2708713 ~ 2709747 (+)
G1510524 LOC106597055 other upstream 1755646 2704842 ~ 2705497 (+)
G1510408 LOC106576654 other upstream 1926468 2534312 ~ 2534675 (+)
G1512020 NA other downstream 148244 4610018 ~ 4617952 (+)
G1512113 NA other downstream 404221 4865995 ~ 4868008 (+)
G1512182 NA other downstream 642313 5104087 ~ 5106088 (+)
G1512205 NA other downstream 780960 5242734 ~ 5243427 (+)

Expression


Co-expression Network