G1511855


Basic Information

Item Value
gene id G1511855
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 4514410 ~ 4516387 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1729818
atatagggaatagggttctatagggctctggtctaaattagtgcactatatatagggaatagggttctatagggctctggtctaaagtagtgcactatatagggaatagggttctgtaaggctctggtctaaagtagtgcactatatagggaatagggttctggtctaaagtagtgcactatatatagggaatagggttctatagggctctggtctaaagtagtgtactatatagggaatagggttctatagggctctggtctaaagtagtgcactatatagggaatagggttctatagggctctggtctaaagtagtgtactatatagggaatagggttctatagggctctggtctaaagtagtgcactatatagggaatagggttctatagggctctggtctaaattagtgtactatatagggaatagggttctatagggctctggtctaaagtagtgtactatatagggaatagggttctatagggctctggtctaaagtagtgtactatatagggaatagggttctatagggctctggtctaaagtagtgcactatatagggaatagggttctttagggctctggtctaaattagtgtactatatagggaatagggttctatagggccctggtctaaagtagtgcactatatagggaatagggttctatagggctctggtctaaagtagtgcactatatagggaatagggttctatagggccctggtctaaagtagtgcactatatagggaatagggttctttagggctctggtctaaattagtgtactatatagggaatagggttctatagggccctggtctaaagtagtgtactatatagggaatagggttctatagggccctggtctaaagtagtgtactatatagggaatagggttctatagggccctggtctaaagtagtgtactatatagggaatagggttctatagggctctggtctaaagtagtgtactatatagggaatagggttctatagggccctggtctaaagtagtgtactatatagggaatagggttctatagtgctctggtctaaagtagtgcactatatatagggaatagggttctatagtgctctggtctaaagtagtgcactatatatagggaatagggttctataggcctctggtctaaagtagtgcactat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1729818 True 1175 lncRNA 0.41 3 4514410 4516387

Neighbor

gene id symbol gene type direction distance location
LOC118941057 NA coding upstream 1214182 3299441 ~ 3300228 (+)
LOC118941056 NA coding upstream 1299956 3214038 ~ 3214454 (+)
tdrd3 LOC106592742 coding upstream 2060640 2377933 ~ 2453770 (+)
LOC118941055 NA coding upstream 2782320 1731224 ~ 1732090 (+)
LOC118941054 NA coding upstream 3654611 854370 ~ 859799 (+)
LOC118941040 LOC106593609 coding downstream 101701 4618088 ~ 4624857 (+)
LOC110516278 LOC106600620 coding downstream 137654 4654041 ~ 4748243 (+)
LOC110528775 LOC106575958 coding downstream 364281 4880668 ~ 4933600 (+)
LOC110495595 LOC106574881 coding downstream 379527 4895914 ~ 5043592 (+)
LOC118941222 NA coding downstream 467573 4944941 ~ 5000801 (+)
G1511853 NA non-coding upstream 411 4512351 ~ 4513999 (+)
G1511846 NA non-coding upstream 10563 4503647 ~ 4503847 (+)
G1511471 NA non-coding upstream 22496 4486978 ~ 4491914 (+)
G1511461 NA non-coding upstream 52636 4461143 ~ 4461774 (+)
G1511458 NA non-coding upstream 62461 4451379 ~ 4451949 (+)
G1511871 NA non-coding downstream 45186 4561573 ~ 4564497 (+)
G1512004 NA non-coding downstream 58144 4574531 ~ 4601843 (+)
G1512005 NA non-coding downstream 70466 4586853 ~ 4637099 (+)
G1512023 NA non-coding downstream 98137 4614524 ~ 4615064 (+)
G1512024 NA non-coding downstream 99201 4615588 ~ 4616222 (+)
G1511398 NA other upstream 229466 4281416 ~ 4284944 (+)
G1510639 NA other upstream 1640244 2872394 ~ 2874290 (+)
G1510527 NA other upstream 1804663 2708713 ~ 2709747 (+)
G1510524 LOC106597055 other upstream 1808913 2704842 ~ 2705497 (+)
G1510408 LOC106576654 other upstream 1979735 2534312 ~ 2534675 (+)
G1512020 NA other downstream 93631 4610018 ~ 4617952 (+)
G1512113 NA other downstream 349608 4865995 ~ 4868008 (+)
G1512182 NA other downstream 587700 5104087 ~ 5106088 (+)
G1512205 NA other downstream 726347 5242734 ~ 5243427 (+)

Expression


Co-expression Network