G1512020


Basic Information

Item Value
gene id G1512020
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 4610018 ~ 4617952 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1729999
TGTAGAGGTGGGTAGCAGCATTCTCTCTGtggatctctctctgtcacaacAAGACAACATCTATTGATCCTGTTCCTGATCCGTGTTAGGAGGAGGAGTGGGTTCTGAGACTTCCAACTGAAAGATCACAAACAGCCATACATTACCATTATTCTCTGGGTGCCGTTGGCAACAACCAATACAATGATAACAAAAGATTTGCCGTCGGATCACATCTATGCGTACGCTCTGTCCAAGACTCTGATTAAagtgtcctctcctgctacagTGGGCCTCTACTCATCATGTCAGAACCGCATCAACATGATCCTCAGATATATAGAGGTCCACATGGagcaggaggcagagaggagggagcagagttACCAGGGCAGGTCCAAGCCTCGTTCCGTCAAAGCCTCCATCACTGGTCTCCTAGCTCTGATCTGCAGGCTGCTGTTCTACCGACCCGTCTGGACGCGAGGAGAACCAGCGGCGGAAGAATGTCCGGTTCATCTATGTTCGGTTCTCCGCATGGCACTTCGCCGGGAGTGACCTCCTCTGGGCGGGGCTGGTGATGAGACTGTGCCTGGCACTGCAGGAGAGCTTTGGGAAACTTCAGCTGGGTCTGTACCGCGTGGCGCAGCACAACGAGGAGGATGAGGTGAGGAAGAAGGTGATTGAAAACACATCGTCAGAGTGGAGATCTAAGAAGTTCTGCTGTTTCCCTCTCTGGTCCCTGGTCCTGGCCGTGCTGCTGGCTGCTCTCACAGTCCTCGTCTTTCTGGTGAAGTATGGCTTCCCGGAGGTTCCAGACGCACCTGAACTGGAC
>TU1730000
TGTAGAGGTGGGTAGCAGCATTCTCTCTGtggatctctctctgtcacaacAAGACAACATCTATTGATCCTGTTCCTGATCCGTGTTAGGAGGAGGAGTGGGTTCTGAGACTTCCAACTGAAAGATCACAAACAGCCATACATTACCATTATTCTCTGGGTGCCGTTGGCAACAACCAATACAATGATAACAAAAGATTTGCCGTCGGATCACATCTATGCGTACGCTCTGTCCAAGACTCTGATTAAagtgtcctctcctgctacagTGGGCCTCTACTCATCATGTCAGAACCGCATCAACATGATCCTCAGATATATAGAGGTCCACATGGagcaggaggcagagaggagggagcagagttACCAGGGCAGGTCCAAGCCTCGTTCCGTCAAAGCCTCCATCACTGGTCTCCTAGCTCTGATCTGCAGGCTGCTGTTCTACCGACCCGTCTGGACGCGAGGAGAACCAGCGGCGGAAGAATGTCCGGTTCATCTATGTTCGGTTCTCCGCATGGCACTTCGCCGGGAGTGACCTCCTCTGGGCGGGGCTGGTGATGAGACTGTGCCTGGCACTGCAGGAGAGCTTTGGGAAACTTCAGGTGGGTtacctagaggttagaggttaacttcaggtaggtagcctagaggttagaggttaacTTCAGGTaggtaacctagaggtt

Function

NR:

description
PREDICTED: NTPase KAP family P-loop domain-containing protein 1-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1729999 False 811 TUCP 0.53 6 4610018 4617952
TU1730000 True 685 TUCP 0.51 5 4610018 4616749

Neighbor

gene id symbol gene type direction distance location
LOC118941057 NA coding upstream 1309790 3299441 ~ 3300228 (+)
LOC118941056 NA coding upstream 1395564 3214038 ~ 3214454 (+)
tdrd3 LOC106592742 coding upstream 2156248 2377933 ~ 2453770 (+)
LOC118941055 NA coding upstream 2877928 1731224 ~ 1732090 (+)
LOC118941054 NA coding upstream 3750219 854370 ~ 859799 (+)
LOC118941040 LOC106593609 coding downstream 136 4618088 ~ 4624857 (+)
LOC110516278 LOC106600620 coding downstream 36089 4654041 ~ 4748243 (+)
LOC110528775 LOC106575958 coding downstream 262716 4880668 ~ 4933600 (+)
LOC110495595 LOC106574881 coding downstream 277962 4895914 ~ 5043592 (+)
LOC118941222 NA coding downstream 366008 4944941 ~ 5000801 (+)
G1512004 NA non-coding upstream 8175 4574531 ~ 4601843 (+)
G1511871 NA non-coding upstream 45521 4561573 ~ 4564497 (+)
G1511855 NA non-coding upstream 93631 4514410 ~ 4516387 (+)
G1511853 NA non-coding upstream 96019 4512351 ~ 4513999 (+)
G1511846 NA non-coding upstream 106171 4503647 ~ 4503847 (+)
G1512027 NA non-coding downstream 10783 4628735 ~ 4629158 (+)
G1511974 LOC106592258 non-coding downstream 156192 4774144 ~ 4822072 (+)
G1512080 NA non-coding downstream 157624 4775576 ~ 4821454 (+)
G1511972 NA non-coding downstream 195460 4813412 ~ 4815949 (+)
G1511398 NA other upstream 325074 4281416 ~ 4284944 (+)
G1510639 NA other upstream 1735852 2872394 ~ 2874290 (+)
G1510527 NA other upstream 1900271 2708713 ~ 2709747 (+)
G1510524 LOC106597055 other upstream 1904521 2704842 ~ 2705497 (+)
G1510408 LOC106576654 other upstream 2075343 2534312 ~ 2534675 (+)
G1512113 NA other downstream 248043 4865995 ~ 4868008 (+)
G1512182 NA other downstream 486135 5104087 ~ 5106088 (+)
G1512205 NA other downstream 624782 5242734 ~ 5243427 (+)
G1512309 NA other downstream 989956 5607908 ~ 5613036 (+)

Expression


Co-expression Network