G1512023


Basic Information

Item Value
gene id G1512023
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 4614524 ~ 4615064 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1730004
ATCCTGTCTCATAGAGGGTAGGTAGACACCACATGATCCTGTCTCATAGAGGGTAGGTAGACACCACATGATCCTGTCTCATAGAGGGTAGGTAGACACCACATGATCCTGTCTTATAGAGGGTAGGTAGACACCACATGATCCTGTCATATAAAGGGTAGACACAACATGATCCTGTCATATAGAGGGTAGGTAGACACAACATGATCCTGTCTTATAGAGGGTAGACACAACATGATCCTGTCATATAGAGGGTAGGTAGACACCACATGATCCTGTCTCATAGAGGGTAGGTAGACACCACATGATCCTGTCTCATAGAGGGTAGGTAGACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1730004 True 336 lncRNA 0.46 2 4614524 4615064

Neighbor

gene id symbol gene type direction distance location
LOC118941057 NA coding upstream 1314296 3299441 ~ 3300228 (+)
LOC118941056 NA coding upstream 1400070 3214038 ~ 3214454 (+)
tdrd3 LOC106592742 coding upstream 2160754 2377933 ~ 2453770 (+)
LOC118941055 NA coding upstream 2882434 1731224 ~ 1732090 (+)
LOC118941054 NA coding upstream 3754725 854370 ~ 859799 (+)
LOC118941040 LOC106593609 coding downstream 3024 4618088 ~ 4624857 (+)
LOC110516278 LOC106600620 coding downstream 38977 4654041 ~ 4748243 (+)
LOC110528775 LOC106575958 coding downstream 265604 4880668 ~ 4933600 (+)
LOC110495595 LOC106574881 coding downstream 280850 4895914 ~ 5043592 (+)
LOC118941222 NA coding downstream 368896 4944941 ~ 5000801 (+)
G1512004 NA non-coding upstream 12681 4574531 ~ 4601843 (+)
G1511871 NA non-coding upstream 50027 4561573 ~ 4564497 (+)
G1511855 NA non-coding upstream 98137 4514410 ~ 4516387 (+)
G1511853 NA non-coding upstream 100525 4512351 ~ 4513999 (+)
G1511846 NA non-coding upstream 110677 4503647 ~ 4503847 (+)
G1512024 NA non-coding downstream 524 4615588 ~ 4616222 (+)
G1512027 NA non-coding downstream 13671 4628735 ~ 4629158 (+)
G1511974 LOC106592258 non-coding downstream 159080 4774144 ~ 4822072 (+)
G1512080 NA non-coding downstream 160512 4775576 ~ 4821454 (+)
G1511398 NA other upstream 329580 4281416 ~ 4284944 (+)
G1510639 NA other upstream 1740358 2872394 ~ 2874290 (+)
G1510527 NA other upstream 1904777 2708713 ~ 2709747 (+)
G1510524 LOC106597055 other upstream 1909027 2704842 ~ 2705497 (+)
G1510408 LOC106576654 other upstream 2079849 2534312 ~ 2534675 (+)
G1512113 NA other downstream 250931 4865995 ~ 4868008 (+)
G1512182 NA other downstream 489023 5104087 ~ 5106088 (+)
G1512205 NA other downstream 627670 5242734 ~ 5243427 (+)
G1512309 NA other downstream 992844 5607908 ~ 5613036 (+)

Expression


Co-expression Network