Gene
RNA
| Item | Value |
|---|---|
| gene id | G1512724 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 4678115 ~ 4901102 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1730842 | True | 339 | lncRNA | 0.37 | 2 | 4678115 | 4901102 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528793 | LOC106594540 | coding | downstream | 97521 | 4569056 ~ 4580594 (-) |
| LOC110512986 | pcdh9 | coding | downstream | 381477 | 3745732 ~ 4296638 (-) |
| LOC118941076 | NA | coding | downstream | 589618 | 4087675 ~ 4088497 (-) |
| LOC110495377 | LOC106595604 | coding | downstream | 2138471 | 2526726 ~ 2539644 (-) |
| LOC110517047 | LOC106574932 | coding | downstream | 2338128 | 1803391 ~ 2339987 (-) |
| LOC110528886 | LOC106592258 | coding | upstream | 55348 | 4956450 ~ 5097338 (-) |
| LOC110514545 | LOC106574716 | coding | upstream | 188638 | 5068836 ~ 5188461 (-) |
| LOC110511156 | LOC106575856 | coding | upstream | 316736 | 5217838 ~ 5225285 (-) |
| LOC110517120 | LOC106576008 | coding | upstream | 328890 | 5229992 ~ 5652429 (-) |
| LOC118941224 | NA | coding | upstream | 366046 | 5267148 ~ 5267312 (-) |
| G1512565 | NA | non-coding | downstream | 48026 | 4628124 ~ 4630089 (-) |
| G1512692 | NA | non-coding | downstream | 85970 | 4577025 ~ 4592145 (-) |
| G1512690 | NA | non-coding | downstream | 91013 | 4572392 ~ 4587102 (-) |
| G1511850 | NA | non-coding | downstream | 171420 | 4505710 ~ 4506695 (-) |
| G1511838 | NA | non-coding | downstream | 186435 | 4490593 ~ 4491680 (-) |
| G1512807 | NA | non-coding | upstream | 37645 | 4938747 ~ 5502542 (-) |
| G1512808 | NA | non-coding | upstream | 43299 | 4944401 ~ 4944740 (-) |
| G1512595 | NA | non-coding | upstream | 62608 | 4963710 ~ 4964290 (-) |
| G1512817 | NA | non-coding | upstream | 72261 | 4973363 ~ 4974003 (-) |
| G1512844 | NA | non-coding | upstream | 133380 | 5034482 ~ 5048037 (-) |
| G1510865 | NA | other | downstream | 1472192 | 3205375 ~ 3205923 (-) |
| G1510645 | NA | other | downstream | 1798738 | 2878653 ~ 2879377 (-) |
| LOC110495376 | pcdh17 | other | downstream | 3512693 | 1004783 ~ 1165747 (-) |
| G1509514 | NA | other | downstream | 3535726 | 1141548 ~ 1142389 (-) |
| G1512560 | LOC106574716 | other | upstream | 408459 | 5281447 ~ 5321420 (-) |
| LOC118941221 | NA | other | upstream | 507889 | 5408991 ~ 5718855 (-) |
| LOC110515909 | LOC106592258 | other | upstream | 896686 | 5493050 ~ 5870220 (-) |
| LOC110495369 | lims1 | other | upstream | 1008297 | 5898100 ~ 5913381 (-) |
| LOC118941020 | LOC106595074 | other | upstream | 1057689 | 5956579 ~ 5961996 (-) |
