Gene
RNA
| Item | Value |
|---|---|
| gene id | G1512768 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 4787714 ~ 4863606 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1730890 | True | 478 | lncRNA | 0.37 | 2 | 4787714 | 4863606 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516275 | LOC106574953 | coding | downstream | 3158 | 4583805 ~ 4784556 (-) |
| LOC110528793 | LOC106594540 | coding | downstream | 207120 | 4569056 ~ 4580594 (-) |
| LOC110512986 | pcdh9 | coding | downstream | 491076 | 3745732 ~ 4296638 (-) |
| LOC118941076 | NA | coding | downstream | 699217 | 4087675 ~ 4088497 (-) |
| LOC110495377 | LOC106595604 | coding | downstream | 2248070 | 2526726 ~ 2539644 (-) |
| LOC110528886 | LOC106592258 | coding | upstream | 92844 | 4956450 ~ 5097338 (-) |
| LOC110514545 | LOC106574716 | coding | upstream | 226134 | 5068836 ~ 5188461 (-) |
| LOC110511156 | LOC106575856 | coding | upstream | 354232 | 5217838 ~ 5225285 (-) |
| LOC110517120 | LOC106576008 | coding | upstream | 366386 | 5229992 ~ 5652429 (-) |
| LOC118941224 | NA | coding | upstream | 403542 | 5267148 ~ 5267312 (-) |
| G1512764 | NA | non-coding | downstream | 5140 | 4777169 ~ 4782574 (-) |
| G1512758 | NA | non-coding | downstream | 31092 | 4755041 ~ 4756622 (-) |
| G1512655 | NA | non-coding | downstream | 46217 | 4663120 ~ 4741497 (-) |
| G1512750 | NA | non-coding | downstream | 52594 | 4734798 ~ 4735120 (-) |
| G1512565 | NA | non-coding | downstream | 157625 | 4628124 ~ 4630089 (-) |
| G1512807 | NA | non-coding | upstream | 75141 | 4938747 ~ 5502542 (-) |
| G1512808 | NA | non-coding | upstream | 80795 | 4944401 ~ 4944740 (-) |
| G1512595 | NA | non-coding | upstream | 100104 | 4963710 ~ 4964290 (-) |
| G1512817 | NA | non-coding | upstream | 109757 | 4973363 ~ 4974003 (-) |
| G1512844 | NA | non-coding | upstream | 170876 | 5034482 ~ 5048037 (-) |
| G1510865 | NA | other | downstream | 1581791 | 3205375 ~ 3205923 (-) |
| G1510645 | NA | other | downstream | 1908337 | 2878653 ~ 2879377 (-) |
| LOC110517047 | LOC106574932 | other | downstream | 2448158 | 1803391 ~ 2339987 (-) |
| LOC110495376 | pcdh17 | other | downstream | 3622292 | 1004783 ~ 1165747 (-) |
| G1509514 | NA | other | downstream | 3645325 | 1141548 ~ 1142389 (-) |
| G1512560 | LOC106574716 | other | upstream | 445955 | 5281447 ~ 5321420 (-) |
| LOC118941221 | NA | other | upstream | 545385 | 5408991 ~ 5718855 (-) |
| LOC110515909 | LOC106592258 | other | upstream | 934182 | 5493050 ~ 5870220 (-) |
| LOC110495369 | lims1 | other | upstream | 1045793 | 5898100 ~ 5913381 (-) |
| LOC118941020 | LOC106595074 | other | upstream | 1095185 | 5956579 ~ 5961996 (-) |
