G1512168


Basic Information

Item Value
gene id G1512168
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 5080648 ~ 5172352 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1730180
cttccacctcatgacttggtttttgctctgacatgcactgtgaaatgtgggaccttatatagacaggtgtgtgcctttccaaatcatgtccaatcaattgaatttaccacaggttgacaacaatcaagttgtagaaacatctcaaggatgatcaatggaaacaggatgcacctgagttcaatgttgagtctcatagcaaagggtctgaatacatacataaataaggtat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1730180 True 229 lncRNA 0.39 2 5080648 5172352

Neighbor

gene id symbol gene type direction distance location
LOC110495595 LOC106574881 coding upstream 37056 4895914 ~ 5043592 (+)
LOC118941222 NA coding upstream 96513 4944941 ~ 5000801 (+)
LOC110528775 LOC106575958 coding upstream 189663 4880668 ~ 4933600 (+)
LOC110516278 LOC106600620 coding upstream 332405 4654041 ~ 4748243 (+)
LOC118941040 LOC106593609 coding upstream 455791 4618088 ~ 4624857 (+)
LOC118941027 NA coding downstream 95456 5267808 ~ 5275200 (+)
LOC110513970 LOC106575958 coding downstream 289550 5461902 ~ 5702970 (+)
LOC110495587 LOC106592870 coding downstream 354011 5526363 ~ 5637190 (+)
LOC118941022 NA coding downstream 401039 5573391 ~ 5576479 (+)
LOC118941025 NA coding downstream 419275 5591627 ~ 5593672 (+)
G1512130 NA non-coding upstream 128540 4950984 ~ 4952108 (+)
G1512101 NA non-coding upstream 162523 4884861 ~ 4918125 (+)
G1511952 NA non-coding downstream 83050 5255402 ~ 5255791 (+)
G1511882 NA non-coding downstream 109093 5281445 ~ 5324126 (+)
G1511895 LOC106574716 non-coding downstream 136319 5308671 ~ 5312593 (+)
G1511978 LOC106592258 non-coding downstream 152421 5324773 ~ 5329556 (+)
G1511982 NA non-coding downstream 177281 5349633 ~ 5747483 (+)
G1512113 NA other upstream 212640 4865995 ~ 4868008 (+)
G1512020 NA other upstream 462696 4610018 ~ 4617952 (+)
G1511398 NA other upstream 795704 4281416 ~ 4284944 (+)
G1510639 NA other upstream 2206482 2872394 ~ 2874290 (+)
G1512205 NA other downstream 70382 5242734 ~ 5243427 (+)
G1512309 NA other downstream 435556 5607908 ~ 5613036 (+)
LOC110518779 dis3 other downstream 1005488 6172823 ~ 6188926 (+)
LOC110495361 LOC106575795 other downstream 1226411 6398763 ~ 6403517 (+)

Expression


Co-expression Network