G1512205


Basic Information

Item Value
gene id G1512205
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 5242734 ~ 5243427 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1730220
gtcattatggggtattgtgatgtcattatggggtattgtgatgtcattatggggtattgtgatgtcattatggggtattgtgatgtcattatggggtattgtgatgtcattatggggtattgtgatgtcattatgggatattgtgatgtcattatggggtattgtgatgtcattatgggatattgtgatgtcattatgggatattgtgatgtcattatgggatattgtgatgtcattatgggatattgtgatgtcattatggggtattgtgatgtcattatgggatattgtgatgtcattatgggatattgtgatgtcattatgggatattgtgatgtcattatgggatattgtgatgtcattatgggatattgtgtgtagattgatgaggatttttatttatttaatccattttagaataaggctgtaacgtaacaaaatgtggggaaagtcaaggggtctaaattcTTCCTGAATGGgagaggggatacctagtcagttgtacaactgaatgcattcaactgaaatgtgtcttccacatttaacccaacctctgaatcagagaggggcTGCCAGAATCGACATCCAT

Function

NR:

description
PREDICTED: coiled-coil domain-containing protein 70-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1730220 True 589 TUCP 0.37 2 5242734 5243427

Neighbor

gene id symbol gene type direction distance location
LOC110495595 LOC106574881 coding upstream 199142 4895914 ~ 5043592 (+)
LOC118941222 NA coding upstream 258599 4944941 ~ 5000801 (+)
LOC110528775 LOC106575958 coding upstream 351749 4880668 ~ 4933600 (+)
LOC110516278 LOC106600620 coding upstream 494491 4654041 ~ 4748243 (+)
LOC118941040 LOC106593609 coding upstream 617877 4618088 ~ 4624857 (+)
LOC118941027 NA coding downstream 24381 5267808 ~ 5275200 (+)
LOC110513970 LOC106575958 coding downstream 218475 5461902 ~ 5702970 (+)
LOC110495587 LOC106592870 coding downstream 282936 5526363 ~ 5637190 (+)
LOC118941022 NA coding downstream 329964 5573391 ~ 5576479 (+)
LOC118941025 NA coding downstream 348200 5591627 ~ 5593672 (+)
G1512167 NA non-coding upstream 66225 5075737 ~ 5176509 (+)
G1512168 NA non-coding upstream 70382 5080648 ~ 5172352 (+)
LOC110510710 LOC106575389 non-coding upstream 86061 5152929 ~ 5739611 (+)
G1512171 NA non-coding upstream 157736 5084758 ~ 5084998 (+)
G1511952 NA non-coding downstream 11975 5255402 ~ 5255791 (+)
G1511882 NA non-coding downstream 38018 5281445 ~ 5324126 (+)
G1511895 LOC106574716 non-coding downstream 65244 5308671 ~ 5312593 (+)
G1511978 LOC106592258 non-coding downstream 81346 5324773 ~ 5329556 (+)
G1511982 NA non-coding downstream 106206 5349633 ~ 5747483 (+)
G1512182 NA other upstream 136646 5104087 ~ 5106088 (+)
G1512113 NA other upstream 374726 4865995 ~ 4868008 (+)
G1512020 NA other upstream 624782 4610018 ~ 4617952 (+)
G1511398 NA other upstream 957790 4281416 ~ 4284944 (+)
G1512309 NA other downstream 364481 5607908 ~ 5613036 (+)
LOC110518779 dis3 other downstream 934413 6172823 ~ 6188926 (+)
LOC110495361 LOC106575795 other downstream 1155336 6398763 ~ 6403517 (+)
LOC110496964 LOC106594657 other downstream 1197425 6404433 ~ 6459931 (+)

Expression


Co-expression Network