G1511952


Basic Information

Item Value
gene id G1511952
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 5255402 ~ 5255791 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1729931
agtacagtagagtacaggaaAGAAAAGTAACAgttagttcagtagagtacaacagtacagagtatagtacagtataacgtATTGTACTTTACTCTAATGTTCTCCATTGGGGCTGGACGATATGGACCAAAAAATCATACAGCTTTATCTTGAGTTTTCAAACTTCTAGGTGATTCACCATAAATATCTCAGTTTAGATTCTCTCTAAATAAGCCTTGTACAATTAAAGGTTgaatacactgcatttcaaacagtcagcaataatctaatAAATTCAGGGCTTGTGAAGTTATACCGAGGCTAAATATAACCATAACACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1729931 True 320 lncRNA 0.34 2 5255402 5255791

Neighbor

gene id symbol gene type direction distance location
LOC110495595 LOC106574881 coding upstream 211810 4895914 ~ 5043592 (+)
LOC118941222 NA coding upstream 271267 4944941 ~ 5000801 (+)
LOC110528775 LOC106575958 coding upstream 364417 4880668 ~ 4933600 (+)
LOC110516278 LOC106600620 coding upstream 507159 4654041 ~ 4748243 (+)
LOC118941040 LOC106593609 coding upstream 630545 4618088 ~ 4624857 (+)
LOC118941027 NA coding downstream 12017 5267808 ~ 5275200 (+)
LOC110513970 LOC106575958 coding downstream 206111 5461902 ~ 5702970 (+)
LOC110495587 LOC106592870 coding downstream 270572 5526363 ~ 5637190 (+)
LOC118941022 NA coding downstream 317600 5573391 ~ 5576479 (+)
LOC118941025 NA coding downstream 335836 5591627 ~ 5593672 (+)
G1512167 NA non-coding upstream 78893 5075737 ~ 5176509 (+)
G1512168 NA non-coding upstream 83050 5080648 ~ 5172352 (+)
LOC110510710 LOC106575389 non-coding upstream 98729 5152929 ~ 5739611 (+)
G1512171 NA non-coding upstream 170404 5084758 ~ 5084998 (+)
G1511882 NA non-coding downstream 25654 5281445 ~ 5324126 (+)
G1511895 LOC106574716 non-coding downstream 52880 5308671 ~ 5312593 (+)
G1511978 LOC106592258 non-coding downstream 68982 5324773 ~ 5329556 (+)
G1511982 NA non-coding downstream 93842 5349633 ~ 5747483 (+)
G1512243 NA non-coding downstream 159887 5415678 ~ 5416176 (+)
G1512205 NA other upstream 11975 5242734 ~ 5243427 (+)
G1512182 NA other upstream 149314 5104087 ~ 5106088 (+)
G1512113 NA other upstream 387394 4865995 ~ 4868008 (+)
G1512020 NA other upstream 637450 4610018 ~ 4617952 (+)
G1512309 NA other downstream 352117 5607908 ~ 5613036 (+)
LOC110518779 dis3 other downstream 922049 6172823 ~ 6188926 (+)
LOC110495361 LOC106575795 other downstream 1142972 6398763 ~ 6403517 (+)
LOC110496964 LOC106594657 other downstream 1185061 6404433 ~ 6459931 (+)

Expression


Co-expression Network