G1511982


Basic Information

Item Value
gene id G1511982
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 5349633 ~ 5747483 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1729961
ACTCTTGACAGTTCTGGCACTTTATTCTCTATAAGAGGAACatgagctcaagcagtagaaattTGAGGTGCTGGTACTCAGCTCCAGTGAGCTCCTGTCCAATTCAAGCACTGATCTCATTTCAACAGATCTGGTAGCTAAGCATTGACAACAAAACACGAGTTCATTCACATTAGACAAAGTATACACTTTATATTAGGCTACAGAACTTAATCTATAGTAGATTTCTGAATTGACATAAATGACTCAAAAAACATTTAGTACAAGGTTGCAGTATGTTTCAGGCAGCACTATGTACTATTTTCCTGAATAA

Function

NR:

description
PREDICTED: zinc finger protein 2 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1729961 True 313 lncRNA 0.37 2 5349633 5747483

Neighbor

gene id symbol gene type direction distance location
LOC118941027 NA coding upstream 74433 5267808 ~ 5275200 (+)
LOC110495595 LOC106574881 coding upstream 306041 4895914 ~ 5043592 (+)
LOC118941222 NA coding upstream 365498 4944941 ~ 5000801 (+)
LOC110528775 LOC106575958 coding upstream 458648 4880668 ~ 4933600 (+)
LOC110516278 LOC106600620 coding upstream 601390 4654041 ~ 4748243 (+)
LOC110512403 gas6 coding downstream 176020 5923503 ~ 5949854 (+)
LOC118941026 NA coding downstream 199264 5946747 ~ 5947078 (+)
LOC118941029 NA coding downstream 200059 5947542 ~ 5948154 (+)
LOC110519329 atp4b coding downstream 254261 6001744 ~ 6007442 (+)
LOC118941024 dcun1d2 coding downstream 301919 5998183 ~ 6065189 (+)
G1511978 LOC106592258 non-coding upstream 20077 5324773 ~ 5329556 (+)
G1511882 NA non-coding upstream 25507 5281445 ~ 5324126 (+)
G1511895 LOC106574716 non-coding upstream 37040 5308671 ~ 5312593 (+)
G1511952 NA non-coding upstream 93842 5255402 ~ 5255791 (+)
G1512167 NA non-coding upstream 173124 5075737 ~ 5176509 (+)
G1511977 NA non-coding downstream 100346 5847829 ~ 5862162 (+)
G1512406 NA non-coding downstream 145124 5892607 ~ 5892871 (+)
G1512407 NA non-coding downstream 145502 5892985 ~ 5893193 (+)
G1512410 NA non-coding downstream 148001 5895484 ~ 5896813 (+)
G1511942 NA non-coding downstream 150252 5897735 ~ 5898009 (+)
G1512205 NA other upstream 106206 5242734 ~ 5243427 (+)
G1512182 NA other upstream 243545 5104087 ~ 5106088 (+)
G1512113 NA other upstream 481625 4865995 ~ 4868008 (+)
G1512020 NA other upstream 731681 4610018 ~ 4617952 (+)
LOC110518779 dis3 other downstream 430357 6172823 ~ 6188926 (+)
LOC110495361 LOC106575795 other downstream 651280 6398763 ~ 6403517 (+)
LOC110496964 LOC106594657 other downstream 693369 6404433 ~ 6459931 (+)
LOC110514219 LOC106594890 other downstream 803162 6493403 ~ 6573608 (+)
LOC110516612 LOC106574917 other downstream 961176 6705632 ~ 6710286 (+)

Expression


Co-expression Network