G1512300


Basic Information

Item Value
gene id G1512300
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 5568478 ~ 5580047 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1730327
tgcacatttaacatgctgttaGAAATGTGGTAAaattgatttaagtttccctgcattaaagtctctggctactaggagcgccccctttaaaatatatatataaatatcaccttttatttaaccaggtaggctagttgagaacaagttctcatttgcaaccgcgacctggccaagataaagcatagcagtgtgaacagacaacacagagttacacatggagtaaacaattaacaagtcaataacacagtagaaaaaaagagtctatatacattgtgtgcaaaaggcatgaggaggtaggcgaataattacaattttgcagattaacactggagtgata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1730327 True 337 lncRNA 0.36 2 5568478 5580047

Neighbor

gene id symbol gene type direction distance location
LOC118941027 NA coding upstream 293278 5267808 ~ 5275200 (+)
LOC110495595 LOC106574881 coding upstream 524886 4895914 ~ 5043592 (+)
LOC118941222 NA coding upstream 584343 4944941 ~ 5000801 (+)
LOC110528775 LOC106575958 coding upstream 677493 4880668 ~ 4933600 (+)
LOC110516278 LOC106600620 coding upstream 820235 4654041 ~ 4748243 (+)
LOC118941025 NA coding downstream 11580 5591627 ~ 5593672 (+)
LOC110519537 LOC106592870 coding downstream 124704 5704751 ~ 5708466 (+)
LOC110512403 gas6 coding downstream 343456 5923503 ~ 5949854 (+)
LOC118941026 NA coding downstream 366700 5946747 ~ 5947078 (+)
LOC118941029 NA coding downstream 367495 5947542 ~ 5948154 (+)
G1512295 NA non-coding upstream 6505 5560879 ~ 5561973 (+)
LOC110495587 LOC106592870 non-coding upstream 22953 5526363 ~ 5637190 (+)
G1512284 NA non-coding upstream 23612 5539148 ~ 5544866 (+)
G1512275 NA non-coding upstream 57316 5510885 ~ 5511162 (+)
G1512261 NA non-coding upstream 113932 5453597 ~ 5454546 (+)
G1511955 LOC106574716 non-coding downstream 65777 5645824 ~ 5651171 (+)
G1511977 NA non-coding downstream 267782 5847829 ~ 5862162 (+)
G1512406 NA non-coding downstream 312560 5892607 ~ 5892871 (+)
G1512205 NA other upstream 325051 5242734 ~ 5243427 (+)
G1512182 NA other upstream 462390 5104087 ~ 5106088 (+)
G1512113 NA other upstream 700470 4865995 ~ 4868008 (+)
G1512020 NA other upstream 950526 4610018 ~ 4617952 (+)
G1512309 NA other downstream 27861 5607908 ~ 5613036 (+)
LOC110513970 LOC106575958 other downstream 83921 5461902 ~ 5702970 (+)
LOC110518779 dis3 other downstream 597793 6172823 ~ 6188926 (+)
LOC110495361 LOC106575795 other downstream 818716 6398763 ~ 6403517 (+)
LOC110496964 LOC106594657 other downstream 860805 6404433 ~ 6459931 (+)

Expression


Co-expression Network