G1511977


Basic Information

Item Value
gene id G1511977
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 5847829 ~ 5862162 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1729956
CATCATAAACAGATTTCCCAATcttctcctcttcatctttaatgttgacattcagctccagtgtttgactgcagtcttccagcttcactgatgccatctctggatcctgcagtgcaaaatgggctccactgtcacaatcaggacccagtgactgtaggtttggactcagtgtggaaggagagaggcaggctgggtttgtcctcactgttgatgtttCTGGCCTCAGACTTGACCTGAGTCGGCC

Function

NR:

description
PREDICTED: zinc finger protein 501-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1729956 True 244 lncRNA 0.49 2 5847829 5862162

Neighbor

gene id symbol gene type direction distance location
LOC110510710 LOC106575389 coding upstream 108218 5152929 ~ 5739611 (+)
LOC110519537 LOC106592870 coding upstream 139363 5704751 ~ 5708466 (+)
LOC110513970 LOC106575958 coding upstream 144859 5461902 ~ 5702970 (+)
LOC110495587 LOC106592870 coding upstream 210639 5526363 ~ 5637190 (+)
LOC118941025 NA coding upstream 254485 5591627 ~ 5593672 (+)
LOC110512403 gas6 coding downstream 61341 5923503 ~ 5949854 (+)
LOC118941026 NA coding downstream 84585 5946747 ~ 5947078 (+)
LOC118941029 NA coding downstream 85380 5947542 ~ 5948154 (+)
LOC110519329 atp4b coding downstream 139582 6001744 ~ 6007442 (+)
LOC118941024 dcun1d2 coding downstream 187240 5998183 ~ 6065189 (+)
G1511982 NA non-coding upstream 100346 5349633 ~ 5747483 (+)
G1511955 LOC106574716 non-coding upstream 196658 5645824 ~ 5651171 (+)
G1512276 LOC106592870 non-coding upstream 253113 5521390 ~ 5594716 (+)
G1512406 NA non-coding downstream 30445 5892607 ~ 5892871 (+)
G1512407 NA non-coding downstream 30823 5892985 ~ 5893193 (+)
G1512410 NA non-coding downstream 33322 5895484 ~ 5896813 (+)
G1511942 NA non-coding downstream 35573 5897735 ~ 5898009 (+)
G1511880 NA non-coding downstream 36123 5898285 ~ 5899385 (+)
G1512309 NA other upstream 234793 5607908 ~ 5613036 (+)
G1512205 NA other upstream 604402 5242734 ~ 5243427 (+)
G1512182 NA other upstream 741741 5104087 ~ 5106088 (+)
LOC110495595 LOC106574881 other upstream 821499 4895914 ~ 5043592 (+)
LOC110518779 dis3 other downstream 315678 6172823 ~ 6188926 (+)
LOC110495361 LOC106575795 other downstream 536601 6398763 ~ 6403517 (+)
LOC110496964 LOC106594657 other downstream 578690 6404433 ~ 6459931 (+)
LOC110514219 LOC106594890 other downstream 688483 6493403 ~ 6573608 (+)
LOC110516612 LOC106574917 other downstream 846497 6705632 ~ 6710286 (+)

Expression


Co-expression Network