G1512502


Basic Information

Item Value
gene id G1512502
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 6164105 ~ 6164375 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1730566
CTTGAAGCAGGATGAGTGGCTGTAGATCTGTAGATCCTCCAGGATCATGTTGGCTCCAGCCACCATCGGTTTACAGCAGTACGAACACAGGCCCTTGGTCACACTCCTGTACAGCAGAGGGCAGTAGTGAGTTGGGGATAGAGAGAACACAATAGTGACAGCTTTGCTGAGTGCAGAGTCAGCACCTGTGATGTTCAAGGACGATAAGACAAACACAGTCCTGATACAGTGTTCATTTACACATTATAatattttttaacatttattttga

Function

NR:

description
PREDICTED: uncharacterized protein LOC106583510 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1730566 True 271 lncRNA 0.45 1 6164105 6164375

Neighbor

gene id symbol gene type direction distance location
LOC118941019 tgfbrap1 coding upstream 6129 6146666 ~ 6157976 (+)
LOC110527156 LOC106575911 coding upstream 67504 6082293 ~ 6096601 (+)
LOC110511044 adprhl1 coding upstream 81922 6070774 ~ 6082183 (+)
LOC118941024 dcun1d2 coding upstream 98916 5998183 ~ 6065189 (+)
LOC110519329 atp4b coding upstream 156663 6001744 ~ 6007442 (+)
LOC110518779 dis3 coding downstream 8448 6172823 ~ 6188926 (+)
mzt1 NA coding downstream 37010 6201385 ~ 6203248 (+)
ubac2 LOC106591293 coding downstream 154526 6318901 ~ 6351781 (+)
LOC110512784 LOC106574826 coding downstream 187541 6351916 ~ 6384414 (+)
LOC110495361 LOC106575795 coding downstream 235773 6398763 ~ 6403517 (+)
G1512498 NA non-coding upstream 1222 6162286 ~ 6162883 (+)
G1512497 NA non-coding upstream 2554 6160737 ~ 6161551 (+)
G1512499 NA non-coding upstream 4727 6159134 ~ 6159378 (+)
G1512426 NA non-coding upstream 41926 6121628 ~ 6122179 (+)
G1512503 NA non-coding downstream 1147 6165522 ~ 6166835 (+)
G1512504 NA non-coding downstream 3403 6167778 ~ 6168018 (+)
G1512506 NA non-coding downstream 4926 6169301 ~ 6169926 (+)
G1512526 NA non-coding downstream 76077 6240452 ~ 6241742 (+)
LOC110513970 LOC106575958 other upstream 492772 5461902 ~ 5702970 (+)
G1512309 NA other upstream 551069 5607908 ~ 5613036 (+)
G1512205 NA other upstream 920678 5242734 ~ 5243427 (+)
G1512182 NA other upstream 1058017 5104087 ~ 5106088 (+)
LOC110495595 LOC106574881 other upstream 1137775 4895914 ~ 5043592 (+)
LOC110496964 LOC106594657 other downstream 276477 6404433 ~ 6459931 (+)
LOC110514219 LOC106594890 other downstream 386270 6493403 ~ 6573608 (+)
LOC110516612 LOC106574917 other downstream 544284 6705632 ~ 6710286 (+)

Expression


Co-expression Network