G1512503


Basic Information

Item Value
gene id G1512503
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 6165522 ~ 6166835 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1730567
GCATAGAGCCAACATGGAAATGAAttgttttggaaatatttagagAATTCCAAAAACAAATCTTCCCCCTTGtgacagcctggtctcatagactagacgtaacatagtaaaagtaaTTCCAGGACTCTAAtcagtatgatatgttaccttgggtgtggttacataagacagaaggctATGAAGGCAAACCCCCAAATGttgcgtgtttgaatctcatcatggacaactttagcattttagccaATTAGCAACATTGCAACTACCCTTTTAATTTAactcctaatcttaaccctaacccctagcctagctaatgttatccacctagctaacattagctttagccacctagctaatgttatccacctagctaacattagctttagccacctagctaatgttatccacctagctaacattagctttagccacctagccaacgttagccacaacaaattggaattcgtaacatatcatacatctAGAAAATTCcagctgtgctgggtggagataaGAGAACATGGCCATTAAGTCCAGATCGTTcctcaagatgttcaaacgttcatagatgaccagcagggtcaaataataatcacagtgcagagttaaaaagtaagaacataacaaaggaaacagtaacacaataaaataactgtTCATTGTTGTCATGACTTTGAATGCATACTGCCAATCATCAATGTTCATTATGTCAGAAGTACCTGATCTCACTGATTACAACTTGGGGcattggaggtggtggtggtagagttgTTGGAGTTGTTGGAGGTGGTGGAGTtgttggaggtggtggtggtagagttgttggaggaggtggtggtggtagagttgttggaggtggtggagttgTTGGGACTGCCGGGGGCTCTTCATCAGTGATGTGGGTAATGGCGTGGGGGAGTACCTCTGGAGGGCTTAGTGGGGAGTAGAATAGTTTTTTGGGGGAGGAAAAGACCCTTGCAGTAAAGAGGGACATGGATGGGCTCTTCAGCGATGAGC

Function

NR:

description
PREDICTED: vegetative cell wall protein gp1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1730567 True 1014 lncRNA 0.43 4 6165522 6166835

Neighbor

gene id symbol gene type direction distance location
LOC118941019 tgfbrap1 coding upstream 7546 6146666 ~ 6157976 (+)
LOC110527156 LOC106575911 coding upstream 68921 6082293 ~ 6096601 (+)
LOC110511044 adprhl1 coding upstream 83339 6070774 ~ 6082183 (+)
LOC118941024 dcun1d2 coding upstream 100333 5998183 ~ 6065189 (+)
LOC110519329 atp4b coding upstream 158080 6001744 ~ 6007442 (+)
LOC110518779 dis3 coding downstream 5988 6172823 ~ 6188926 (+)
mzt1 NA coding downstream 34550 6201385 ~ 6203248 (+)
ubac2 LOC106591293 coding downstream 152066 6318901 ~ 6351781 (+)
LOC110512784 LOC106574826 coding downstream 185081 6351916 ~ 6384414 (+)
LOC110495361 LOC106575795 coding downstream 233313 6398763 ~ 6403517 (+)
G1512502 NA non-coding upstream 1147 6164105 ~ 6164375 (+)
G1512498 NA non-coding upstream 2639 6162286 ~ 6162883 (+)
G1512497 NA non-coding upstream 3971 6160737 ~ 6161551 (+)
G1512499 NA non-coding upstream 6144 6159134 ~ 6159378 (+)
G1512504 NA non-coding downstream 943 6167778 ~ 6168018 (+)
G1512506 NA non-coding downstream 2466 6169301 ~ 6169926 (+)
G1512526 NA non-coding downstream 73617 6240452 ~ 6241742 (+)
G1512540 NA non-coding downstream 110747 6277582 ~ 6279381 (+)
LOC110513970 LOC106575958 other upstream 494189 5461902 ~ 5702970 (+)
G1512309 NA other upstream 552486 5607908 ~ 5613036 (+)
G1512205 NA other upstream 922095 5242734 ~ 5243427 (+)
G1512182 NA other upstream 1059434 5104087 ~ 5106088 (+)
LOC110495595 LOC106574881 other upstream 1139192 4895914 ~ 5043592 (+)
LOC110496964 LOC106594657 other downstream 274017 6404433 ~ 6459931 (+)
LOC110514219 LOC106594890 other downstream 383810 6493403 ~ 6573608 (+)
LOC110516612 LOC106574917 other downstream 541824 6705632 ~ 6710286 (+)

Expression


Co-expression Network