G1512540


Basic Information

Item Value
gene id G1512540
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 6277582 ~ 6279381 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1730607
aggtagagaggcctgcagaggtggggtgtgactcagaacatagtctacaggaacacttcacagagcacaggtagagaggcctgcagaggtggggtgtgactcagaacatagtctacaggaacacttcacagagcacaggtagagaggcctgcagaggtggggtgtaactcagaacatagtctacaggaacagggGGAGAACATTGACTACAGGAACAGTGGGAGAACAGTCTACAGGAACACAgagaacatagtctacaggaacactgagagaacatagtctacaggaacactggGAGAACACAGACTACAGGAACACTGAGAGAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1730607 True 328 lncRNA 0.50 3 6277582 6279381

Neighbor

gene id symbol gene type direction distance location
mzt1 NA coding upstream 74334 6201385 ~ 6203248 (+)
LOC110518779 dis3 coding upstream 88656 6172823 ~ 6188926 (+)
LOC118941019 tgfbrap1 coding upstream 119606 6146666 ~ 6157976 (+)
LOC110527156 LOC106575911 coding upstream 180981 6082293 ~ 6096601 (+)
LOC110511044 adprhl1 coding upstream 195399 6070774 ~ 6082183 (+)
ubac2 LOC106591293 coding downstream 39520 6318901 ~ 6351781 (+)
LOC110512784 LOC106574826 coding downstream 72535 6351916 ~ 6384414 (+)
LOC110495361 LOC106575795 coding downstream 120767 6398763 ~ 6403517 (+)
LOC110496964 LOC106594657 coding downstream 125052 6404433 ~ 6459931 (+)
LOC118941080 NA coding downstream 210850 6490231 ~ 6491752 (+)
G1512526 NA non-coding upstream 35840 6240452 ~ 6241742 (+)
G1512506 NA non-coding upstream 107656 6169301 ~ 6169926 (+)
G1512504 NA non-coding upstream 109564 6167778 ~ 6168018 (+)
G1512503 NA non-coding upstream 110747 6165522 ~ 6166835 (+)
G1512523 NA non-coding downstream 16930 6296311 ~ 6296678 (+)
G1512534 NA non-coding downstream 43497 6322878 ~ 6325377 (+)
G1512548 NA non-coding downstream 51093 6330474 ~ 6332939 (+)
G1512536 NA non-coding downstream 66341 6345722 ~ 6346181 (+)
G1513174 NA non-coding downstream 98349 6377730 ~ 6377948 (+)
LOC110513970 LOC106575958 other upstream 606249 5461902 ~ 5702970 (+)
G1512309 NA other upstream 664546 5607908 ~ 5613036 (+)
G1512205 NA other upstream 1034155 5242734 ~ 5243427 (+)
G1512182 NA other upstream 1171494 5104087 ~ 5106088 (+)
LOC110514219 LOC106594890 other downstream 271264 6493403 ~ 6573608 (+)
LOC110516612 LOC106574917 other downstream 429278 6705632 ~ 6710286 (+)
G1513452 NA other downstream 746827 7026208 ~ 7026810 (+)

Expression


Co-expression Network