G1512523


Basic Information

Item Value
gene id G1512523
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 6296311 ~ 6296678 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1730588
CAACCGCACACTCAACCGCACACTCAACCGCACACTCAACCACACACTCAACCACACACTCAACCACACCCTCTTATTTTAGCTTGCTACGTAAAAGGTGAAAGATGAAAAAAAGGTAACATTTCCCAGATATTCTCTTTCAGCtccaaatgaaataaatataagtttctctctcttctctctcttctctctttgctGTGAACTTGTAATGCCTCTCTGTCACATTGTCCTTCAAAAGCTTTGTCTCCTTCAGCCAGAATGGAAGAGCACAATGACCAGCGAACTACAGGACAATGGACCAGAGAACTACAGGACAATGGACCAGAGAACTACAGGACAATGGACCAGAGAACTACAGGACAATGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1730588 True 368 lncRNA 0.44 1 6296311 6296678

Neighbor

gene id symbol gene type direction distance location
mzt1 NA coding upstream 93063 6201385 ~ 6203248 (+)
LOC110518779 dis3 coding upstream 107385 6172823 ~ 6188926 (+)
LOC118941019 tgfbrap1 coding upstream 138335 6146666 ~ 6157976 (+)
LOC110527156 LOC106575911 coding upstream 199710 6082293 ~ 6096601 (+)
LOC110511044 adprhl1 coding upstream 214128 6070774 ~ 6082183 (+)
ubac2 LOC106591293 coding downstream 22223 6318901 ~ 6351781 (+)
LOC110512784 LOC106574826 coding downstream 55238 6351916 ~ 6384414 (+)
LOC110495361 LOC106575795 coding downstream 103470 6398763 ~ 6403517 (+)
LOC110496964 LOC106594657 coding downstream 107755 6404433 ~ 6459931 (+)
LOC118941080 NA coding downstream 193553 6490231 ~ 6491752 (+)
G1512540 NA non-coding upstream 16930 6277582 ~ 6279381 (+)
G1512526 NA non-coding upstream 54569 6240452 ~ 6241742 (+)
G1512506 NA non-coding upstream 126385 6169301 ~ 6169926 (+)
G1512504 NA non-coding upstream 128293 6167778 ~ 6168018 (+)
G1512534 NA non-coding downstream 26200 6322878 ~ 6325377 (+)
G1512548 NA non-coding downstream 33796 6330474 ~ 6332939 (+)
G1512536 NA non-coding downstream 49044 6345722 ~ 6346181 (+)
G1513174 NA non-coding downstream 81052 6377730 ~ 6377948 (+)
G1513181 NA non-coding downstream 93362 6390040 ~ 6390317 (+)
LOC110513970 LOC106575958 other upstream 624978 5461902 ~ 5702970 (+)
G1512309 NA other upstream 683275 5607908 ~ 5613036 (+)
G1512205 NA other upstream 1052884 5242734 ~ 5243427 (+)
G1512182 NA other upstream 1190223 5104087 ~ 5106088 (+)
LOC110514219 LOC106594890 other downstream 253967 6493403 ~ 6573608 (+)
LOC110516612 LOC106574917 other downstream 411981 6705632 ~ 6710286 (+)
G1513452 NA other downstream 729530 7026208 ~ 7026810 (+)

Expression


Co-expression Network