G1512534


Basic Information

Item Value
gene id G1512534
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 6322878 ~ 6325377 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1730601
TTCTGGAACCTTGTAAAGGCGCTGTTTAGTTCTGGAACCTTGTAAAGGCGCTGCTGTTTTCTTGTGTTTATGGGACCTTGATTTCCATCTTTTTCACATTCGTTTTGAAATAGCAGAGTGAGCAAATAAATAATATtaaaacaagcatttcttattggacaagttcaggtagtccctttCTGTTTCAGTTCCTTTTTCTTCCGTTTGGTTTCAATACAACCCAGGACAAATAAGTGTGTCTAGACTAGTGGTTCTGTGTCTCTATGGCCTAGTAGTGGTCATCTCAAGGACCAGGACAGGCTCAGGGGTAGTTGGTTGGTGGGATGTGGCTCCTGTCTCaggggtagttggttggatgtggCTCCTGTCTCAGGGGTAGTTGGTTGGTGGGATGTGGCTCCTGTCTCAGGGGTAGTTGGTCGGTGGGATGTGGCTCCTGTCTCAGGGGTAGTTGGTTGGTGGGATGTGGCTCCTGTCTCAGGGGTAGTTGGTTGGTGGGATGTGGCTCCTGTCTCAGGGGTAGTTGGTTGGTGGGATGTGGCTCCTGTCTCAGGGGTAGTTGGTTGGTGGGATGTGGCTCCTGTCTCAGGGGTAGTTGGTTGGTGGGATGTGGCTCCTGTCTCAGGGGTAGTTGGTTGGTGGGATGTGGCTCCTGTCTCAGGGGTAGTTGGTTGGTGGGATGTGGCTCCTGTCTCaggggtagttggttggatgtaGCTCCTGTCTCaggggtagttggttggatgtggCTCCTGTCTCAGGGGTAGTTGGTGGGATGTGGCTCCTCTCTCAGGGTTAGTTGGTGGGATGTGGCTCCTGTCTCAGGGTTAGTTGGTGGGATGTGGCTCCTGTCTCAGGGGTAGTTGGTTAGTTGTGGCTCCTGTCTCaggggtagttggttggatgtgaCTCCTGTCTCaggggtagttggttggatgtgaCTCCTGTCTCaggggtagttggttggatgtgaCTCCTGTCTCGGTCTCTGGCCCAGGAATGGTCTTTGTAAGATTATCTAAAGCAACAGGACAAGCTGTGTGGCTACCCAGCCTGCTCCTCCCGTCCCGGGTCCCCCCCCGTTTGAAGGGGGTGTCCTCCCCGGTTCGGACCACGCTGGAGAAAGAGGCGCTGACCTGAACCCTCAACATCTTCATCACCCTCCTCTTGTAACCCTTACAGGCAAAGAAGTAGACAAAGGGGTCCAGGCAGCAGTTGAAGTTCATGAGACACACAGTGAAGTGTAGAGACAtctgaaggggagggagagaggggttaaTGGAGGAGTCGGTCACACGTGGATTGGAGATGGACATTGCACACACGCTTAAATACACAATCTCATggtcaacacacacaaaaatacaatgATATTAACAGATAGGCCTATGtttgtgtgtcagtggaggctggtagAAGGCGCTGTAGGAGGAAGGGCTCGTTGTAATTCATGGAACtcatgtttgactctgttccattcattccattccagcctttacaataagcccatcctcctatagctcctcccaccagcctccgctGGTGTGGAGACAACTACCTGAAAGGCCTGTAGCTCGGTACAGTCTGGTGTGTATCTCAGCTTTCGGATCATATACTGCAGGATGTTGATGTGATAGGGACTGAAACACACTACAAACACCAACACTACCCCTGCTATCACCCCCGTCGCCTTCTGGCTCCTCAATGACCTGTGACCTCGCCCACCGACCCTACTTCTCGTCACCAACCGCAGCTTCCAAAGCAACACCAAGTAGCAACACAGGATGGTTGCAACGGGAACGCCGTATCCCATGACGACGGCTCCAATGAGGACGTAGGGGAGTCCCTCCACGGCCCCGTTCTCAAAGTTGGGGTACTCCATGCAGGTGGTGGTTCCGTCCGGCTCGGCCCGGGTCATGGTCACGGAGAGGAGGGGTAACGTCTGGACCAGGACTAGAACCCACACCCCTACGCAGACGTAGCGGATGGTCCGGGCCCGGCAGAGCCTGGTGTAACGCAGAGGGAGAACCACGGCTACGAAGCGGTCTACGG

Function

NR:

description
PREDICTED: G-protein coupled receptor 183-like isoform X1

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1730601 True 2052 lncRNA 0.53 3 6322878 6325377

Neighbor

gene id symbol gene type direction distance location
mzt1 NA coding upstream 119630 6201385 ~ 6203248 (+)
LOC110518779 dis3 coding upstream 133952 6172823 ~ 6188926 (+)
LOC118941019 tgfbrap1 coding upstream 164902 6146666 ~ 6157976 (+)
LOC110527156 LOC106575911 coding upstream 226277 6082293 ~ 6096601 (+)
LOC110511044 adprhl1 coding upstream 240695 6070774 ~ 6082183 (+)
LOC110512784 LOC106574826 coding downstream 26539 6351916 ~ 6384414 (+)
LOC110495361 LOC106575795 coding downstream 74771 6398763 ~ 6403517 (+)
LOC110496964 LOC106594657 coding downstream 79056 6404433 ~ 6459931 (+)
LOC118941080 NA coding downstream 164854 6490231 ~ 6491752 (+)
LOC110514219 LOC106594890 coding downstream 168026 6493403 ~ 6573608 (+)
G1512523 NA non-coding upstream 26200 6296311 ~ 6296678 (+)
G1512540 NA non-coding upstream 43497 6277582 ~ 6279381 (+)
G1512526 NA non-coding upstream 81136 6240452 ~ 6241742 (+)
G1512506 NA non-coding upstream 152952 6169301 ~ 6169926 (+)
G1512548 NA non-coding downstream 5097 6330474 ~ 6332939 (+)
G1512536 NA non-coding downstream 20345 6345722 ~ 6346181 (+)
G1513174 NA non-coding downstream 52353 6377730 ~ 6377948 (+)
G1513181 NA non-coding downstream 64663 6390040 ~ 6390317 (+)
G1513183 NA non-coding downstream 68322 6393699 ~ 6394103 (+)
LOC110513970 LOC106575958 other upstream 651545 5461902 ~ 5702970 (+)
G1512309 NA other upstream 709842 5607908 ~ 5613036 (+)
G1512205 NA other upstream 1079451 5242734 ~ 5243427 (+)
G1512182 NA other upstream 1216790 5104087 ~ 5106088 (+)
LOC110516612 LOC106574917 other downstream 383282 6705632 ~ 6710286 (+)
G1513452 NA other downstream 700831 7026208 ~ 7026810 (+)

Expression


Co-expression Network