Gene
RNA
| Item | Value |
|---|---|
| gene id | G1513237 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 6467824 ~ 6468432 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1731490 | False | 609 | lncRNA | 0.36 | 1 | 6467824 | 6468432 |
| TU1731491 | True | 283 | lncRNA | 0.37 | 1 | 6467824 | 6468106 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495359 | LOC106574929 | coding | downstream | 68458 | 6395094 ~ 6399366 (-) |
| LOC110496909 | LOC106594730 | coding | downstream | 134209 | 6322458 ~ 6334499 (-) |
| LOC110518947 | LOC106574830 | coding | downstream | 157890 | 6214712 ~ 6309934 (-) |
| LOC110527161 | bora | coding | downstream | 266468 | 6189018 ~ 6201356 (-) |
| LOC110527169 | LOC106583510 | coding | downstream | 301432 | 6162838 ~ 6166392 (-) |
| march4l | LOC106596293 | coding | upstream | 1437 | 6469869 ~ 6487667 (-) |
| LOC110496972 | LOC106599110 | coding | upstream | 248784 | 6716209 ~ 6748196 (-) |
| LOC110516626 | LOC106592365 | coding | upstream | 279854 | 6748286 ~ 6778559 (-) |
| LOC110496971 | LOC106595477 | coding | upstream | 310377 | 6778809 ~ 6794192 (-) |
| LOC110496995 | LOC106574861 | coding | upstream | 326013 | 6794445 ~ 6804342 (-) |
| G1513236 | NA | non-coding | downstream | 120 | 6466999 ~ 6467704 (-) |
| G1513241 | NA | non-coding | downstream | 1212 | 6466338 ~ 6466612 (-) |
| G1513240 | NA | non-coding | downstream | 2185 | 6465420 ~ 6465639 (-) |
| G1513235 | NA | non-coding | downstream | 2625 | 6464270 ~ 6465199 (-) |
| G1513233 | NA | non-coding | downstream | 7242 | 6459937 ~ 6460582 (-) |
| G1513288 | NA | non-coding | upstream | 34445 | 6502877 ~ 6503440 (-) |
| G1513289 | NA | non-coding | upstream | 35014 | 6503446 ~ 6504179 (-) |
| G1513290 | NA | non-coding | upstream | 36851 | 6505283 ~ 6506353 (-) |
| G1513293 | LOC106574831 | non-coding | upstream | 44026 | 6512458 ~ 6513540 (-) |
| G1513296 | vps8 | non-coding | upstream | 48808 | 6517240 ~ 6524336 (-) |
| LOC110527162 | LOC106575909 | other | downstream | 322489 | 6119017 ~ 6145394 (-) |
| LOC110513718 | lamp1 | other | downstream | 353051 | 6096877 ~ 6114832 (-) |
| LOC110495371 | LOC106574843 | other | downstream | 446978 | 6006457 ~ 6020888 (-) |
| G1512558 | NA | other | downstream | 480301 | 5985279 ~ 5987523 (-) |
| G1513662 | NA | other | upstream | 479253 | 6947685 ~ 7002174 (-) |
| LOC118936564 | LOC106600438 | other | upstream | 523807 | 6969882 ~ 7031728 (-) |
| G1513731 | NA | other | upstream | 650129 | 7118561 ~ 7118790 (-) |
| G1513768 | NA | other | upstream | 728917 | 7197349 ~ 7197646 (-) |
