Gene
RNA
| Item | Value |
|---|---|
| gene id | G1513253 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 6492291 ~ 6492721 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1731516 | True | 431 | lncRNA | 0.41 | 1 | 6492291 | 6492721 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941080 | NA | coding | upstream | 539 | 6490231 ~ 6491752 (+) |
| LOC110496964 | LOC106594657 | coding | upstream | 32360 | 6404433 ~ 6459931 (+) |
| LOC110495361 | LOC106575795 | coding | upstream | 88774 | 6398763 ~ 6403517 (+) |
| LOC110512784 | LOC106574826 | coding | upstream | 107877 | 6351916 ~ 6384414 (+) |
| ubac2 | LOC106591293 | coding | upstream | 140510 | 6318901 ~ 6351781 (+) |
| LOC110514219 | LOC106594890 | coding | downstream | 682 | 6493403 ~ 6573608 (+) |
| LOC110516612 | LOC106574917 | coding | downstream | 212911 | 6705632 ~ 6710286 (+) |
| syap1 | syap1 | coding | downstream | 314558 | 6807279 ~ 6815407 (+) |
| LOC110495421 | LOC106593174 | coding | downstream | 322765 | 6815486 ~ 6837266 (+) |
| LOC110495417 | LOC106575977 | coding | downstream | 350638 | 6843359 ~ 6850547 (+) |
| G1513199 | NA | non-coding | upstream | 23859 | 6468161 ~ 6468432 (+) |
| G1513201 | NA | non-coding | upstream | 24202 | 6467789 ~ 6468089 (+) |
| G1513218 | NA | non-coding | upstream | 25711 | 6466279 ~ 6466580 (+) |
| G1513197 | NA | non-coding | upstream | 27319 | 6464282 ~ 6464972 (+) |
| G1513200 | NA | non-coding | upstream | 29505 | 6461949 ~ 6462786 (+) |
| G1513263 | NA | non-coding | downstream | 11706 | 6504427 ~ 6504875 (+) |
| G1513257 | NA | non-coding | downstream | 37805 | 6530526 ~ 6530808 (+) |
| G1513266 | NA | non-coding | downstream | 38202 | 6530923 ~ 6532332 (+) |
| G1513273 | NA | non-coding | downstream | 51952 | 6544673 ~ 6546166 (+) |
| G1513277 | NA | non-coding | downstream | 70298 | 6563019 ~ 6563520 (+) |
| LOC110518779 | dis3 | other | upstream | 313180 | 6172823 ~ 6188926 (+) |
| LOC110513970 | LOC106575958 | other | upstream | 820958 | 5461902 ~ 5702970 (+) |
| G1512309 | NA | other | upstream | 879255 | 5607908 ~ 5613036 (+) |
| G1513452 | NA | other | downstream | 533487 | 7026208 ~ 7026810 (+) |
| LOC110513752 | LOC106575969 | other | downstream | 539889 | 7032578 ~ 7102239 (+) |
| G1513874 | NA | other | downstream | 933862 | 7426583 ~ 7426971 (+) |
