Gene
RNA
| Item | Value |
|---|---|
| gene id | G1513263 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 6504427 ~ 6504875 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: putative proline-rich protein 21 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1731536 | False | 239 | lncRNA | 0.46 | 2 | 6504427 | 6504686 |
| TU1731535 | True | 275 | lncRNA | 0.45 | 2 | 6504447 | 6504875 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941080 | NA | coding | upstream | 12675 | 6490231 ~ 6491752 (+) |
| LOC110496964 | LOC106594657 | coding | upstream | 44496 | 6404433 ~ 6459931 (+) |
| LOC110495361 | LOC106575795 | coding | upstream | 100910 | 6398763 ~ 6403517 (+) |
| LOC110512784 | LOC106574826 | coding | upstream | 120013 | 6351916 ~ 6384414 (+) |
| ubac2 | LOC106591293 | coding | upstream | 152646 | 6318901 ~ 6351781 (+) |
| LOC110516612 | LOC106574917 | coding | downstream | 200757 | 6705632 ~ 6710286 (+) |
| syap1 | syap1 | coding | downstream | 302404 | 6807279 ~ 6815407 (+) |
| LOC110495421 | LOC106593174 | coding | downstream | 310611 | 6815486 ~ 6837266 (+) |
| LOC110495417 | LOC106575977 | coding | downstream | 338484 | 6843359 ~ 6850547 (+) |
| LOC110496992 | LOC106574897 | coding | downstream | 358256 | 6863131 ~ 6907469 (+) |
| G1513253 | NA | non-coding | upstream | 11706 | 6492291 ~ 6492721 (+) |
| G1513199 | NA | non-coding | upstream | 35995 | 6468161 ~ 6468432 (+) |
| G1513201 | NA | non-coding | upstream | 36338 | 6467789 ~ 6468089 (+) |
| G1513218 | NA | non-coding | upstream | 37847 | 6466279 ~ 6466580 (+) |
| G1513197 | NA | non-coding | upstream | 39455 | 6464282 ~ 6464972 (+) |
| G1513257 | NA | non-coding | downstream | 25651 | 6530526 ~ 6530808 (+) |
| G1513266 | NA | non-coding | downstream | 26048 | 6530923 ~ 6532332 (+) |
| G1513273 | NA | non-coding | downstream | 39798 | 6544673 ~ 6546166 (+) |
| G1513277 | NA | non-coding | downstream | 58144 | 6563019 ~ 6563520 (+) |
| G1513329 | NA | non-coding | downstream | 206027 | 6710902 ~ 6712240 (+) |
| LOC110518779 | dis3 | other | upstream | 325316 | 6172823 ~ 6188926 (+) |
| LOC110513970 | LOC106575958 | other | upstream | 833094 | 5461902 ~ 5702970 (+) |
| G1512309 | NA | other | upstream | 891391 | 5607908 ~ 5613036 (+) |
| LOC110514219 | LOC106594890 | other | downstream | 45770 | 6493403 ~ 6573608 (+) |
| G1513452 | NA | other | downstream | 521333 | 7026208 ~ 7026810 (+) |
| LOC110513752 | LOC106575969 | other | downstream | 527735 | 7032578 ~ 7102239 (+) |
| G1513874 | NA | other | downstream | 921708 | 7426583 ~ 7426971 (+) |
