Gene
RNA
| Item | Value |
|---|---|
| gene id | G1513273 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 6544673 ~ 6546166 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1731548 | True | 520 | lncRNA | 0.44 | 2 | 6544673 | 6546166 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941080 | NA | coding | upstream | 52921 | 6490231 ~ 6491752 (+) |
| LOC110496964 | LOC106594657 | coding | upstream | 84742 | 6404433 ~ 6459931 (+) |
| LOC110495361 | LOC106575795 | coding | upstream | 141156 | 6398763 ~ 6403517 (+) |
| LOC110512784 | LOC106574826 | coding | upstream | 160259 | 6351916 ~ 6384414 (+) |
| ubac2 | LOC106591293 | coding | upstream | 192892 | 6318901 ~ 6351781 (+) |
| LOC110516612 | LOC106574917 | coding | downstream | 159466 | 6705632 ~ 6710286 (+) |
| syap1 | syap1 | coding | downstream | 261113 | 6807279 ~ 6815407 (+) |
| LOC110495421 | LOC106593174 | coding | downstream | 269320 | 6815486 ~ 6837266 (+) |
| LOC110495417 | LOC106575977 | coding | downstream | 297193 | 6843359 ~ 6850547 (+) |
| LOC110496992 | LOC106574897 | coding | downstream | 316965 | 6863131 ~ 6907469 (+) |
| G1513266 | NA | non-coding | upstream | 12341 | 6530923 ~ 6532332 (+) |
| G1513257 | NA | non-coding | upstream | 13865 | 6530526 ~ 6530808 (+) |
| G1513263 | NA | non-coding | upstream | 39798 | 6504427 ~ 6504875 (+) |
| G1513253 | NA | non-coding | upstream | 51952 | 6492291 ~ 6492721 (+) |
| G1513199 | NA | non-coding | upstream | 76241 | 6468161 ~ 6468432 (+) |
| G1513277 | NA | non-coding | downstream | 16853 | 6563019 ~ 6563520 (+) |
| G1513329 | NA | non-coding | downstream | 164736 | 6710902 ~ 6712240 (+) |
| G1513330 | NA | non-coding | downstream | 166214 | 6712380 ~ 6712819 (+) |
| G1513331 | NA | non-coding | downstream | 167648 | 6713814 ~ 6714671 (+) |
| G1513332 | NA | non-coding | downstream | 168605 | 6714771 ~ 6715516 (+) |
| LOC110518779 | dis3 | other | upstream | 365562 | 6172823 ~ 6188926 (+) |
| LOC110513970 | LOC106575958 | other | upstream | 873340 | 5461902 ~ 5702970 (+) |
| G1512309 | NA | other | upstream | 931637 | 5607908 ~ 5613036 (+) |
| LOC110514219 | LOC106594890 | other | downstream | 4479 | 6493403 ~ 6573608 (+) |
| G1513452 | NA | other | downstream | 480042 | 7026208 ~ 7026810 (+) |
| LOC110513752 | LOC106575969 | other | downstream | 486444 | 7032578 ~ 7102239 (+) |
| G1513874 | NA | other | downstream | 880417 | 7426583 ~ 7426971 (+) |
