Gene
RNA
| Item | Value |
|---|---|
| gene id | G1513332 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 6714771 ~ 6715516 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1731631 | False | 746 | lncRNA | 0.53 | 1 | 6714771 | 6715516 |
| TU1731630 | True | 247 | lncRNA | 0.53 | 1 | 6715270 | 6715516 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516612 | LOC106574917 | coding | upstream | 4485 | 6705632 ~ 6710286 (+) |
| LOC110514219 | LOC106594890 | coding | upstream | 141163 | 6493403 ~ 6573608 (+) |
| LOC118941080 | NA | coding | upstream | 223019 | 6490231 ~ 6491752 (+) |
| LOC110496964 | LOC106594657 | coding | upstream | 254840 | 6404433 ~ 6459931 (+) |
| LOC110495361 | LOC106575795 | coding | upstream | 311254 | 6398763 ~ 6403517 (+) |
| syap1 | syap1 | coding | downstream | 91763 | 6807279 ~ 6815407 (+) |
| LOC110495421 | LOC106593174 | coding | downstream | 99970 | 6815486 ~ 6837266 (+) |
| LOC110495417 | LOC106575977 | coding | downstream | 127843 | 6843359 ~ 6850547 (+) |
| LOC110496992 | LOC106574897 | coding | downstream | 147615 | 6863131 ~ 6907469 (+) |
| LOC118941079 | LOC106572464 | coding | downstream | 231796 | 6947312 ~ 6958804 (+) |
| G1513331 | NA | non-coding | upstream | 100 | 6713814 ~ 6714671 (+) |
| G1513330 | NA | non-coding | upstream | 1952 | 6712380 ~ 6712819 (+) |
| G1513329 | NA | non-coding | upstream | 2531 | 6710902 ~ 6712240 (+) |
| G1513277 | NA | non-coding | upstream | 151251 | 6563019 ~ 6563520 (+) |
| G1513273 | NA | non-coding | upstream | 168605 | 6544673 ~ 6546166 (+) |
| G1513334 | NA | non-coding | downstream | 171 | 6715687 ~ 6716044 (+) |
| G1513333 | NA | non-coding | downstream | 705 | 6716221 ~ 6717418 (+) |
| G1513341 | NA | non-coding | downstream | 22589 | 6738105 ~ 6739883 (+) |
| G1513345 | NA | non-coding | downstream | 32904 | 6748420 ~ 6750329 (+) |
| G1513357 | NA | non-coding | downstream | 36948 | 6752464 ~ 6752800 (+) |
| LOC110518779 | dis3 | other | upstream | 535660 | 6172823 ~ 6188926 (+) |
| G1513452 | NA | other | downstream | 310692 | 7026208 ~ 7026810 (+) |
| LOC110513752 | LOC106575969 | other | downstream | 317094 | 7032578 ~ 7102239 (+) |
| G1513874 | NA | other | downstream | 711067 | 7426583 ~ 7426971 (+) |
| G1513922 | NA | other | downstream | 904780 | 7620296 ~ 7621941 (+) |
| LOC110511355 | LOC106592813 | other | downstream | 1043232 | 7758036 ~ 7801058 (+) |
