G1513345


Basic Information

Item Value
gene id G1513345
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 6748420 ~ 6750329 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1731649
CTTGAAGCCAAAGTGCATAAAGCACTCTGCAGTACCATTGTAAATTTCATAGGGAACTAATCTCCCGTGGGCAGTTTCTGCGTGTAGCTGACCCAACTACGCTGTATTTGACTTCTGGGTTAACAGAGATAACTAGGGAACTAATCTCCCGTGGGCAGTTTCTGCGTGTAGCTGACCCAACTACGCTATATTTGACTTCTGGGTTAACAGAGATAACTAGGGAACTAATCTCCCGTGGGCAGTTTCTGCGTGTAGCTGACCCAACTACGCTATATTTGACTTCTGGGTTAACAGAGATAACTAGGGAACAAGAGACAGAATACATTCTGAAAGAAGACTGAAAGAAAAATGTCCCCATGAGGACCGTCATTCATTATGTCTGTCACCTGAGGAGGAACTAACACACAACTTTACTGGTCCTCTTTTTAAAACGTTCCATTTCTGCTGGATGTTTCTGTCTGTTTGGTCCTAGGTAGTCTCCAATGCAAGTTGTATCTGAGACACCGCCTCTGTGGGAAGAGACTACGTCCTAGTGCAGCCGATTGTCTTTGGTCAAACACACGTGCTCCTGCCATTCACCCCCATTCTCTATTCAGAAATGCATATTATCGTCTTTACAGAACAGAGAAAACAATGAGGCCAAACATAGCACTTTTCTCTCACACATCAGCCTACAGCCAGCATATTTTGATCCATATTCACATCCTCCTTGCATACATTAAACACTTGCAAATTCTATGAGCAAAGCTCATTCATATCATAACTTCAGGATCATGTATGTAACATTTTAATACATGTGAATGATTTACTTTCATAGGTCAAATATTAGATTGTCTCTCTGCACGTGGTTCTGAGACAAGCTTGATGTTAATATCAAGTAGCGGAGACGTCCCAGAGCTGTAGTACAGAAGCAGAAGATAATACTGTAACTGTGTAGAAGAAAAATAGTCAAATAGATAACtttagaaaataaaaacaaataatccTTCCCGACAACTCAAATCATACAAAATTAAACTAACAACTGTCATGAGTGACGTTCTTTTTTCTTTCAAGACATAAAGAAAAAcattcaattttcacctaaagtTCAATCAACGCATACTGTAACACACAAGCGTCCATTTTGTCTCTACCGTGTAGAAACAAAGGTCAAGAcatggccgtgaactgcacatgAACTGTATGGAGAAGTACCCTTCGATGGTTAGAATAATGTAACTGATATGCTATAGTTCGGTTGCTCTTTGGCGAAGACAGGCACAGCATCCGACACGACTGTTTCCCTCAAATCTCATAAAGATCCTTCATAACAATCCGGGAATTGAAAAACAAAAAAGGCACAGTGAAAAATGAAAACAAAAGTATACAGTTTCAACACTACATAGTGGagcaaaaccaaatgcatagccTATAAAACAAGCCTCTGTTGCGACTTTGGTTGGTTTGGAGTGCTGTTCGTTAAATGAGAATATTCTGTCAACTCCAGGCAGAAACACATGGTTGCGTGAGTCCCACTGCAAATATGGTCCTTCCATGGAGGTGCTATATAAGCCTCATGGACAGAGGCAGTGGGAGTGACATACTTACATCCATGTActctgagggagaggaggggagggaagggagggagggagaggaggggaggggagggaagggaaggaggggagaggagacatccCAAAAACGAGCGCTTCACCTGGGGATAGGGGGTAGTGGGGGGGCACCCCTGGACTTTTTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1731649 True 1742 lncRNA 0.42 2 6748420 6750329

Neighbor

gene id symbol gene type direction distance location
LOC110516612 LOC106574917 coding upstream 38134 6705632 ~ 6710286 (+)
LOC110514219 LOC106594890 coding upstream 174812 6493403 ~ 6573608 (+)
LOC118941080 NA coding upstream 256668 6490231 ~ 6491752 (+)
LOC110496964 LOC106594657 coding upstream 288489 6404433 ~ 6459931 (+)
LOC110495361 LOC106575795 coding upstream 344903 6398763 ~ 6403517 (+)
syap1 syap1 coding downstream 56950 6807279 ~ 6815407 (+)
LOC110495421 LOC106593174 coding downstream 65157 6815486 ~ 6837266 (+)
LOC110495417 LOC106575977 coding downstream 93030 6843359 ~ 6850547 (+)
LOC110496992 LOC106574897 coding downstream 112802 6863131 ~ 6907469 (+)
LOC118941079 LOC106572464 coding downstream 196983 6947312 ~ 6958804 (+)
G1513341 NA non-coding upstream 8537 6738105 ~ 6739883 (+)
G1513333 NA non-coding upstream 31002 6716221 ~ 6717418 (+)
G1513334 NA non-coding upstream 32376 6715687 ~ 6716044 (+)
G1513332 NA non-coding upstream 32904 6714771 ~ 6715516 (+)
G1513331 NA non-coding upstream 33749 6713814 ~ 6714671 (+)
G1513357 NA non-coding downstream 2135 6752464 ~ 6752800 (+)
G1513358 NA non-coding downstream 2721 6753050 ~ 6753433 (+)
G1513363 NA non-coding downstream 13074 6763403 ~ 6763767 (+)
G1513364 NA non-coding downstream 14049 6764378 ~ 6764662 (+)
G1513359 NA non-coding downstream 27798 6778127 ~ 6778607 (+)
LOC110518779 dis3 other upstream 569309 6172823 ~ 6188926 (+)
G1513452 NA other downstream 275879 7026208 ~ 7026810 (+)
LOC110513752 LOC106575969 other downstream 282281 7032578 ~ 7102239 (+)
G1513874 NA other downstream 676254 7426583 ~ 7426971 (+)
G1513922 NA other downstream 869967 7620296 ~ 7621941 (+)
LOC110511355 LOC106592813 other downstream 1008419 7758036 ~ 7801058 (+)

Expression


Co-expression Network