G1513413


Basic Information

Item Value
gene id G1513413
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 6939795 ~ 6941918 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1731739
GGTTTAATAGAATAGATCAAACTGGAGGATGGAACACACAGGtttaatagaatagaacacacagggttactagaatagaacacacagggttactagaatagaacacacaggtttaatagaatagaacacacagggttactagaatagaacacacagggttaatagaatagaacacacagggttaatagaatagaacacacagggttaatagaatagaacacacagggttaatagaatagaacacacagggttaatagaatagaacacacagggttaatagaatagaacacacagggttactagaagagaacacacagggttactagaagagaacacacagggttaatagaatagaacacacagggttaatagaatagaacacacagggttaatagaatagaacacacagggttaatagaatagaacacacaggGTTAATAGAATAGAGTTGGGGGTTtaaaaattccagtaactttccccAAATCCCCCGGTATTCCTGCTTACTGCCTCCTGATTCCTGGAATCTTCCAaacgggatttctggaaaacctgggaattttagGTAGGTTACCGGAATTTTACAACTCTAAATAGAGTAGAATCAAACTGAAT

Function

NR:

description
serine/threonine-protein phosphatase with EF-hands 1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1731739 True 612 lncRNA 0.37 2 6939795 6941918

Neighbor

gene id symbol gene type direction distance location
LOC110496992 LOC106574897 coding upstream 32326 6863131 ~ 6907469 (+)
LOC110495417 LOC106575977 coding upstream 89248 6843359 ~ 6850547 (+)
LOC110495421 LOC106593174 coding upstream 102529 6815486 ~ 6837266 (+)
syap1 syap1 coding upstream 124388 6807279 ~ 6815407 (+)
LOC110516612 LOC106574917 coding upstream 229509 6705632 ~ 6710286 (+)
LOC118941079 LOC106572464 coding downstream 5394 6947312 ~ 6958804 (+)
LOC110513752 LOC106575969 coding downstream 90660 7032578 ~ 7102239 (+)
LOC110500299 ace2 coding downstream 378575 7320493 ~ 7339446 (+)
LOC110496985 LOC106563837 coding downstream 440057 7381975 ~ 7406885 (+)
LOC110495413 pir coding downstream 465008 7406926 ~ 7430025 (+)
G1513409 LOC106594775 non-coding upstream 12626 6926840 ~ 6927169 (+)
G1513408 NA non-coding upstream 15839 6922300 ~ 6923956 (+)
G1513407 NA non-coding upstream 19535 6920037 ~ 6920260 (+)
G1513404 NA non-coding upstream 26854 6912313 ~ 6912941 (+)
G1513399 NA non-coding upstream 82916 6856256 ~ 6856879 (+)
G1513441 NA non-coding downstream 65392 7007310 ~ 7008549 (+)
G1513461 NA non-coding downstream 95225 7037143 ~ 7037849 (+)
G1513462 NA non-coding downstream 98622 7040540 ~ 7040999 (+)
G1513480 NA non-coding downstream 153173 7095091 ~ 7096349 (+)
LOC110514219 LOC106594890 other upstream 369316 6493403 ~ 6573608 (+)
LOC110496964 LOC106594657 other upstream 480226 6404433 ~ 6459931 (+)
LOC110495361 LOC106575795 other upstream 536881 6398763 ~ 6403517 (+)
LOC110518779 dis3 other upstream 760684 6172823 ~ 6188926 (+)
G1513452 NA other downstream 84290 7026208 ~ 7026810 (+)
G1513874 NA other downstream 484665 7426583 ~ 7426971 (+)
G1513922 NA other downstream 678378 7620296 ~ 7621941 (+)
LOC110511355 LOC106592813 other downstream 816830 7758036 ~ 7801058 (+)

Expression


Co-expression Network