G1513462


Basic Information

Item Value
gene id G1513462
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 7040540 ~ 7040999 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1731805
TATACATtattcaaccattttccatcctatAAATGTGTAATAatcaaaggctttgatttctggtcaaacagatggaaaaaggtcttagaaaacatctatcAGGAAAaaggtcttagaaaacatctatcAGGAAAaaggtcttagaaaacatctatcAGGAAGAagtattagaaatacatcaaaacacagtcatgttgaagtaaagacccctgccaactaatatcaacacctAGATTTACTTTTGGAGACTTGCCTTCTGTAcatttaagaaacattgccttgtgcccttcccactgggcacagatgttaGTTCAAcctctagttttgatttacatttggttgagttgtcaactaacatgaattcaactAAAAATGTAGGTTCAAAgttgggtaaaaaaaacaaaatggtgGTAACTTTTTGCAGATCTAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1731805 True 432 lncRNA 0.34 2 7040540 7040999

Neighbor

gene id symbol gene type direction distance location
LOC118941079 LOC106572464 coding upstream 81736 6947312 ~ 6958804 (+)
LOC110496992 LOC106574897 coding upstream 133071 6863131 ~ 6907469 (+)
LOC110495417 LOC106575977 coding upstream 189993 6843359 ~ 6850547 (+)
LOC110495421 LOC106593174 coding upstream 203274 6815486 ~ 6837266 (+)
syap1 syap1 coding upstream 225133 6807279 ~ 6815407 (+)
LOC110500299 ace2 coding downstream 279494 7320493 ~ 7339446 (+)
LOC110496985 LOC106563837 coding downstream 340976 7381975 ~ 7406885 (+)
LOC110495413 pir coding downstream 365927 7406926 ~ 7430025 (+)
LOC110495412 vegfd coding downstream 390823 7431822 ~ 7448743 (+)
LOC110495411 LOC106574896 coding downstream 473569 7514568 ~ 7532080 (+)
G1513461 NA non-coding upstream 2691 7037143 ~ 7037849 (+)
G1513441 NA non-coding upstream 31991 7007310 ~ 7008549 (+)
G1513413 NA non-coding upstream 98622 6939795 ~ 6941918 (+)
G1513409 LOC106594775 non-coding upstream 113371 6926840 ~ 6927169 (+)
G1513408 NA non-coding upstream 116584 6922300 ~ 6923956 (+)
LOC110513752 LOC106575969 non-coding downstream 44902 7032578 ~ 7102239 (+)
G1513480 NA non-coding downstream 54092 7095091 ~ 7096349 (+)
G1513482 NA non-coding downstream 58221 7099220 ~ 7100313 (+)
G1513457 LOC106575808 non-coding downstream 62449 7103448 ~ 7105917 (+)
G1513486 NA non-coding downstream 76359 7117358 ~ 7117641 (+)
G1513452 NA other upstream 13730 7026208 ~ 7026810 (+)
LOC110516612 LOC106574917 other upstream 330492 6705632 ~ 6710286 (+)
LOC110514219 LOC106594890 other upstream 470061 6493403 ~ 6573608 (+)
LOC110496964 LOC106594657 other upstream 580971 6404433 ~ 6459931 (+)
LOC110495361 LOC106575795 other upstream 637626 6398763 ~ 6403517 (+)
G1513874 NA other downstream 385584 7426583 ~ 7426971 (+)
G1513922 NA other downstream 579297 7620296 ~ 7621941 (+)
LOC110511355 LOC106592813 other downstream 717749 7758036 ~ 7801058 (+)
G1514045 LOC106574979 other downstream 972861 8013860 ~ 8015030 (+)
G1514180 NA other downstream 1306228 8347227 ~ 8412799 (+)

Expression


Co-expression Network