G1513517


Basic Information

Item Value
gene id G1513517
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 7227121 ~ 7228461 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1731888
tatcctccctctctgtatctctatcctccctctctgtatctctatcatctctctctgtatctatatcatctctctctgtatctatttcatctctctctgtatctctatcctctctgtatctctatcatctctctctgtatctctatcctctctgtatctctataatttCTGTCTGTATCTATATCATCTCTGTGtctatttcatctctctctgtatctctatcatctctctctgtatctatatcatctctctctgtatctctatcctctctgtatctatatcatctctctctgtatctctatcatctctctctgtatctatatcatctctctctgtatctctatcctctctctctgtatctatatcATCTCTGTATCTATATcagctctctctgtatctatatcATCCCTCTTTGTATCTCTATCAtattctctctgtatctctatcctctctctctgtatctatatcATCCCTATCTgtatctctatcatctctctctgtatctatatcctctctgtatctctatcatctctctctgtatctctatcctctctgtatctctatcatctctctgtatctatatcatccctctctgtatctatatcctctctgtatctctatcatctatctctgtatctctatcctctctctctgtatctatattctctctgtatctatatcctctctctgtagCTATAtcatctctctgtgtatctctatcatctctctctgtatctatatcatctctctctgtatctctatcatctctctctgtatctctatcctctctctatttccctctctgtatatctatcatctctctctgtatctatatcacctctccctgtatctctatcatctctctctgtatctctatcctctctgtatctctatcatccctctctgtatctctatcatccctctctgtatctctatcatccctctctgtatctctatcatctctctctgtatctatatcCTCCCTGTATCTATATCCTCTCTGTATCTAtatcctctctgctcctctgttctctctctctctatcttctcgttctttctatatctctatcta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1731888 True 1072 lncRNA 0.38 4 7227121 7228461

Neighbor

gene id symbol gene type direction distance location
LOC110513752 LOC106575969 coding upstream 124882 7032578 ~ 7102239 (+)
LOC118941079 LOC106572464 coding upstream 268317 6947312 ~ 6958804 (+)
LOC110496992 LOC106574897 coding upstream 319652 6863131 ~ 6907469 (+)
LOC110495417 LOC106575977 coding upstream 376574 6843359 ~ 6850547 (+)
LOC110495421 LOC106593174 coding upstream 389855 6815486 ~ 6837266 (+)
LOC110500299 ace2 coding downstream 92032 7320493 ~ 7339446 (+)
LOC110496985 LOC106563837 coding downstream 153514 7381975 ~ 7406885 (+)
LOC110495413 pir coding downstream 178465 7406926 ~ 7430025 (+)
LOC110495412 vegfd coding downstream 203361 7431822 ~ 7448743 (+)
LOC110495411 LOC106574896 coding downstream 286107 7514568 ~ 7532080 (+)
G1513513 NA non-coding upstream 21467 7205005 ~ 7205654 (+)
G1513512 NA non-coding upstream 22290 7204373 ~ 7204831 (+)
G1513501 NA non-coding upstream 59445 7167280 ~ 7167676 (+)
G1513500 NA non-coding upstream 64946 7161920 ~ 7162175 (+)
G1513499 NA non-coding upstream 65354 7160731 ~ 7161767 (+)
G1513866 NA non-coding downstream 162135 7390596 ~ 7390909 (+)
G1513870 NA non-coding downstream 190839 7419300 ~ 7419677 (+)
G1513871 NA non-coding downstream 191605 7420066 ~ 7421582 (+)
G1513875 NA non-coding downstream 202138 7430599 ~ 7430963 (+)
G1513452 NA other upstream 200311 7026208 ~ 7026810 (+)
LOC110516612 LOC106574917 other upstream 517073 6705632 ~ 6710286 (+)
LOC110514219 LOC106594890 other upstream 656642 6493403 ~ 6573608 (+)
LOC110496964 LOC106594657 other upstream 767552 6404433 ~ 6459931 (+)
G1513874 NA other downstream 198122 7426583 ~ 7426971 (+)
G1513922 NA other downstream 391835 7620296 ~ 7621941 (+)
LOC110511355 LOC106592813 other downstream 530287 7758036 ~ 7801058 (+)
G1514045 LOC106574979 other downstream 785399 8013860 ~ 8015030 (+)
G1514180 NA other downstream 1118766 8347227 ~ 8412799 (+)

Expression


Co-expression Network