G1513866


Basic Information

Item Value
gene id G1513866
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 7390596 ~ 7390909 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1732342
tactaattgagtgtatgtaaacttctgacccactgggaatgtgatgaaagaaataaaagctgaaataaatcattctctctacgattattctgacatttcacattcttgaagtggtgatcctaactgacctaagacaggaaatgtttactagtattaaatgtcaggaattgtgaaaaaactgagtgtaaatgtattaggctaaggtgtatgtaaacttctgacttcaactgtaattccaaagggttcatatactgtttcttgccactgtagttgTTCATTAAAATCTATGAACTTGTGATATATAGTGTAACATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1732342 True 314 lncRNA 0.33 1 7390596 7390909

Neighbor

gene id symbol gene type direction distance location
LOC110500299 ace2 coding upstream 51150 7320493 ~ 7339446 (+)
LOC110513752 LOC106575969 coding upstream 288357 7032578 ~ 7102239 (+)
LOC118941079 LOC106572464 coding upstream 431792 6947312 ~ 6958804 (+)
LOC110496992 LOC106574897 coding upstream 483127 6863131 ~ 6907469 (+)
LOC110495417 LOC106575977 coding upstream 540049 6843359 ~ 6850547 (+)
LOC110495413 pir coding downstream 16017 7406926 ~ 7430025 (+)
LOC110495412 vegfd coding downstream 40913 7431822 ~ 7448743 (+)
LOC110495411 LOC106574896 coding downstream 123659 7514568 ~ 7532080 (+)
LOC110495403 LOC106595176 coding downstream 143782 7534691 ~ 7581314 (+)
LOC110496984 LOC106595027 coding downstream 194318 7585227 ~ 7597388 (+)
G1513515 NA non-coding upstream 34693 7225006 ~ 7355903 (+)
G1513517 NA non-coding upstream 162135 7227121 ~ 7228461 (+)
G1513513 NA non-coding upstream 184942 7205005 ~ 7205654 (+)
G1513512 NA non-coding upstream 185765 7204373 ~ 7204831 (+)
G1513501 NA non-coding upstream 222920 7167280 ~ 7167676 (+)
G1513870 NA non-coding downstream 28391 7419300 ~ 7419677 (+)
G1513871 NA non-coding downstream 29157 7420066 ~ 7421582 (+)
G1513875 NA non-coding downstream 39690 7430599 ~ 7430963 (+)
G1513880 NA non-coding downstream 65338 7456247 ~ 7457031 (+)
G1513452 NA other upstream 363786 7026208 ~ 7026810 (+)
LOC110516612 LOC106574917 other upstream 680548 6705632 ~ 6710286 (+)
LOC110514219 LOC106594890 other upstream 820117 6493403 ~ 6573608 (+)
LOC110496964 LOC106594657 other upstream 931027 6404433 ~ 6459931 (+)
G1513874 NA other downstream 35674 7426583 ~ 7426971 (+)
G1513922 NA other downstream 229387 7620296 ~ 7621941 (+)
LOC110511355 LOC106592813 other downstream 367839 7758036 ~ 7801058 (+)
G1514045 LOC106574979 other downstream 622951 8013860 ~ 8015030 (+)
G1514180 NA other downstream 956318 8347227 ~ 8412799 (+)

Expression


Co-expression Network