Gene
RNA
| Item | Value |
|---|---|
| gene id | G1513889 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 7490621 ~ 7491244 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| serine/arginine repetitive matrix protein 2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1732369 | True | 624 | lncRNA | 0.37 | 1 | 7490621 | 7491244 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495412 | vegfd | coding | upstream | 42204 | 7431822 ~ 7448743 (+) |
| LOC110495413 | pir | coding | upstream | 60596 | 7406926 ~ 7430025 (+) |
| LOC110496985 | LOC106563837 | coding | upstream | 83736 | 7381975 ~ 7406885 (+) |
| LOC110500299 | ace2 | coding | upstream | 151175 | 7320493 ~ 7339446 (+) |
| LOC110513752 | LOC106575969 | coding | upstream | 388382 | 7032578 ~ 7102239 (+) |
| LOC110495411 | LOC106574896 | coding | downstream | 23324 | 7514568 ~ 7532080 (+) |
| LOC110495403 | LOC106595176 | coding | downstream | 43447 | 7534691 ~ 7581314 (+) |
| LOC110496984 | LOC106595027 | coding | downstream | 93983 | 7585227 ~ 7597388 (+) |
| LOC110495404 | LOC106574906 | coding | downstream | 109175 | 7600419 ~ 7617337 (+) |
| LOC110518829 | LOC106592802 | coding | downstream | 217430 | 7708674 ~ 7711981 (+) |
| G1513887 | NA | non-coding | upstream | 9859 | 7480409 ~ 7480762 (+) |
| G1513880 | NA | non-coding | upstream | 33590 | 7456247 ~ 7457031 (+) |
| G1513875 | NA | non-coding | upstream | 59658 | 7430599 ~ 7430963 (+) |
| G1513871 | NA | non-coding | upstream | 69039 | 7420066 ~ 7421582 (+) |
| G1513892 | NA | non-coding | downstream | 2711 | 7493955 ~ 7494164 (+) |
| G1513914 | NA | non-coding | downstream | 93122 | 7584366 ~ 7603443 (+) |
| G1513921 | NA | non-coding | downstream | 115241 | 7606485 ~ 7607479 (+) |
| G1513874 | NA | other | upstream | 63650 | 7426583 ~ 7426971 (+) |
| G1513452 | NA | other | upstream | 463811 | 7026208 ~ 7026810 (+) |
| LOC110516612 | LOC106574917 | other | upstream | 780573 | 6705632 ~ 6710286 (+) |
| LOC110514219 | LOC106594890 | other | upstream | 920142 | 6493403 ~ 6573608 (+) |
| G1513922 | NA | other | downstream | 129052 | 7620296 ~ 7621941 (+) |
| LOC110511355 | LOC106592813 | other | downstream | 267504 | 7758036 ~ 7801058 (+) |
| G1514045 | LOC106574979 | other | downstream | 522616 | 8013860 ~ 8015030 (+) |
| G1514180 | NA | other | downstream | 855983 | 8347227 ~ 8412799 (+) |
| LOC110528849 | LOC105022557 | other | downstream | 1007306 | 8498352 ~ 8506254 (+) |
