Gene
RNA
| Item | Value |
|---|---|
| gene id | G1514020 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 7960745 ~ 7961388 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1732542 | True | 644 | lncRNA | 0.44 | 1 | 7960745 | 7961388 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| spag17 | spag17 | coding | upstream | 13935 | 7891187 ~ 7946810 (+) |
| LOC110516423 | LOC106574939 | coding | upstream | 72041 | 7801623 ~ 7888704 (+) |
| LOC110511355 | LOC106592813 | coding | upstream | 163533 | 7758036 ~ 7801058 (+) |
| LOC110511354 | LOC106575893 | coding | upstream | 207021 | 7742795 ~ 7753724 (+) |
| LOC118941082 | LOC106594224 | coding | upstream | 226935 | 7716195 ~ 7733810 (+) |
| LOC118941084 | NA | coding | downstream | 1195 | 7961999 ~ 7965688 (+) |
| LOC118941085 | LOC106575914 | coding | downstream | 508011 | 8469399 ~ 8472672 (+) |
| LOC110528836 | chsta | coding | downstream | 513664 | 8475052 ~ 8479361 (+) |
| LOC110528849 | LOC105022557 | coding | downstream | 536964 | 8498352 ~ 8506254 (+) |
| LOC118936321 | LOC106575888 | coding | downstream | 544751 | 8506139 ~ 8511196 (+) |
| G1514014 | NA | non-coding | upstream | 49198 | 7911263 ~ 7911547 (+) |
| G1514009 | NA | non-coding | upstream | 103824 | 7855974 ~ 7856921 (+) |
| G1514003 | NA | non-coding | upstream | 127902 | 7831502 ~ 7832843 (+) |
| G1513987 | NA | non-coding | upstream | 156613 | 7803731 ~ 7804132 (+) |
| G1514022 | NA | non-coding | downstream | 4957 | 7966345 ~ 8018476 (+) |
| G1514026 | NA | non-coding | downstream | 9466 | 7970854 ~ 7971182 (+) |
| G1514048 | NA | non-coding | downstream | 58561 | 8019949 ~ 8020307 (+) |
| G1514049 | NA | non-coding | downstream | 59112 | 8020500 ~ 8021244 (+) |
| G1513922 | NA | other | upstream | 338804 | 7620296 ~ 7621941 (+) |
| G1513874 | NA | other | upstream | 533774 | 7426583 ~ 7426971 (+) |
| LOC110513752 | LOC106575969 | other | upstream | 863585 | 7032578 ~ 7102239 (+) |
| G1513452 | NA | other | upstream | 933935 | 7026208 ~ 7026810 (+) |
| G1514045 | LOC106574979 | other | downstream | 52472 | 8013860 ~ 8015030 (+) |
| G1514180 | NA | other | downstream | 385839 | 8347227 ~ 8412799 (+) |
| G1514274 | NA | other | downstream | 615105 | 8576493 ~ 8576825 (+) |
| LOC110495394 | LOC106574832 | other | downstream | 712941 | 8623967 ~ 8676626 (+) |
