G1514022


Basic Information

Item Value
gene id G1514022
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 7966345 ~ 8018476 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1732545
AGGATGAGTTATAACAtgatatagactacagtaacaggatgagttataacatgatatagactacagtacagtgacaggatgagttataacatgatatagactacagtacagtaacaggatgagttataacatgatatagactacagtacagagacaggatgagttataacatgatatagactacagtacagtaacaggatgagttataacatgatatagactacagtacaGCCTGTCTCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1732545 True 241 lncRNA 0.34 2 7966345 8018476

Neighbor

gene id symbol gene type direction distance location
LOC118941084 NA coding upstream 3265 7961999 ~ 7965688 (+)
spag17 spag17 coding upstream 19535 7891187 ~ 7946810 (+)
LOC110516423 LOC106574939 coding upstream 77641 7801623 ~ 7888704 (+)
LOC110511355 LOC106592813 coding upstream 169133 7758036 ~ 7801058 (+)
LOC110511354 LOC106575893 coding upstream 212621 7742795 ~ 7753724 (+)
LOC118941085 LOC106575914 coding downstream 450923 8469399 ~ 8472672 (+)
LOC110528836 chsta coding downstream 456576 8475052 ~ 8479361 (+)
LOC110528849 LOC105022557 coding downstream 479876 8498352 ~ 8506254 (+)
LOC118936321 LOC106575888 coding downstream 487663 8506139 ~ 8511196 (+)
LOC110495394 LOC106574832 coding downstream 605775 8623967 ~ 8676626 (+)
G1514020 NA non-coding upstream 4957 7960745 ~ 7961388 (+)
G1514014 NA non-coding upstream 54798 7911263 ~ 7911547 (+)
G1514009 NA non-coding upstream 109424 7855974 ~ 7856921 (+)
G1514003 NA non-coding upstream 133502 7831502 ~ 7832843 (+)
G1514048 NA non-coding downstream 1473 8019949 ~ 8020307 (+)
G1514049 NA non-coding downstream 2024 8020500 ~ 8021244 (+)
G1514050 NA non-coding downstream 3433 8021909 ~ 8022215 (+)
G1514051 NA non-coding downstream 8161 8026637 ~ 8026857 (+)
G1514052 NA non-coding downstream 8547 8027023 ~ 8027269 (+)
G1513922 NA other upstream 344404 7620296 ~ 7621941 (+)
G1513874 NA other upstream 539374 7426583 ~ 7426971 (+)
LOC110513752 LOC106575969 other upstream 869185 7032578 ~ 7102239 (+)
G1513452 NA other upstream 939535 7026208 ~ 7026810 (+)
G1514180 NA other downstream 328751 8347227 ~ 8412799 (+)
G1514274 NA other downstream 558017 8576493 ~ 8576825 (+)
LOC110495395 LOC106574852 other downstream 659972 8677497 ~ 8682383 (+)

Expression


Co-expression Network