G1514056


Basic Information

Item Value
gene id G1514056
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 8033571 ~ 8034238 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1732584
CAGTTTGCGGTCAGTTTGTGGTCAGTTTGTGGTCAGTTTGCGGTCAGTTTGCGGTCAGTTTGCGGTCAGTTTGTGGTCAGTTTGCGGTCAGTTTGCGGTCAGTTTGTGGTCAGTTTGCGGTCAGTTTGCGGTCAGTTTGCGGTCAGTTTGTGGTCAGTTTGCGGTCAGTTTGCGGTCAGTTTGCGGTCAGTTTGTGGTCAGTTTGCGGTCAGTTTGTGGTCAGTTTGCGGTCAGTTTGTGGTCAGTTTGCAGTCAGTTTGTGGTTAGTTTGCAGTCGGGTTGTGGTCAGTTTGTGGTCAGTTTGCAGTCGGGTTGTGGTCAGTTTGTGGTCAGTTTGTGGTCAATTTGCGTAGTATGTAATGGTTGTGGTTGGCGTACTGCGGTCGGTGATAGCAGCTCGTGTCTCCTGGTTGTTGGTTTTGTTCTTCAGGTTCTGGGCTGCAGTCAGCTGACCCTCCAGCTGGGGGCGCCGCCGCTCCATGTCCCCCAGTGCTCCCTACAGAcagcaagacagagacagaacatttCAATGAATATCTGGATGTCAAGTATTTACAACTATTTGAGCCATGTATTTGAGCCATGTATTTGAGCCAGGTCAGTGCCTGTGTTCTCAAAGCGTCTCAGaataagagtgctgatctaggatcagatcccccCCGGTCCAT

Function

NR:

description
rho-related BTB domain-containing protein 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1732584 True 668 lncRNA 0.50 1 8033571 8034238

Neighbor

gene id symbol gene type direction distance location
LOC118941084 NA coding upstream 70491 7961999 ~ 7965688 (+)
spag17 spag17 coding upstream 86761 7891187 ~ 7946810 (+)
LOC110516423 LOC106574939 coding upstream 144867 7801623 ~ 7888704 (+)
LOC110511355 LOC106592813 coding upstream 236359 7758036 ~ 7801058 (+)
LOC110511354 LOC106575893 coding upstream 279847 7742795 ~ 7753724 (+)
LOC118941085 LOC106575914 coding downstream 435161 8469399 ~ 8472672 (+)
LOC110528836 chsta coding downstream 440814 8475052 ~ 8479361 (+)
LOC110528849 LOC105022557 coding downstream 464114 8498352 ~ 8506254 (+)
LOC118936321 LOC106575888 coding downstream 471901 8506139 ~ 8511196 (+)
LOC110495394 LOC106574832 coding downstream 590013 8623967 ~ 8676626 (+)
G1514055 LOC106574979 non-coding upstream 225 8033021 ~ 8033346 (+)
G1514054 NA non-coding upstream 2557 8030703 ~ 8031014 (+)
G1514053 NA non-coding upstream 4640 8028680 ~ 8028931 (+)
G1514052 NA non-coding upstream 6302 8027023 ~ 8027269 (+)
G1514051 NA non-coding upstream 6714 8026637 ~ 8026857 (+)
G1514058 NA non-coding downstream 606 8034844 ~ 8035079 (+)
G1514059 NA non-coding downstream 1466 8035704 ~ 8035978 (+)
G1514060 NA non-coding downstream 7064 8041302 ~ 8041566 (+)
G1514062 NA non-coding downstream 9116 8043354 ~ 8043565 (+)
G1514063 NA non-coding downstream 9568 8043806 ~ 8044216 (+)
G1514045 LOC106574979 other upstream 18541 8013860 ~ 8015030 (+)
G1513922 NA other upstream 411630 7620296 ~ 7621941 (+)
G1513874 NA other upstream 606600 7426583 ~ 7426971 (+)
LOC110513752 LOC106575969 other upstream 936411 7032578 ~ 7102239 (+)
G1514180 NA other downstream 312989 8347227 ~ 8412799 (+)
G1514274 NA other downstream 542255 8576493 ~ 8576825 (+)
LOC110495395 LOC106574852 other downstream 644210 8677497 ~ 8682383 (+)

Expression


Co-expression Network