G1514172


Basic Information

Item Value
gene id G1514172
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 8319464 ~ 8319939 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1732788
AGTTAAGGTATTCATTGtgagtggttaagtttaggtattcatcgtgagtggttaagtttaggtattcattgtgAGTGGTTAAGTTAAGGTATTCATTGTGAGtagttaagtttagGTATTCATTGTGAGTGGTTAAGTTAAGGTATTCATTGTGAGTGGTTAAGTTAAGGTATTCATTGtgagtggttaagtttaggtattcattgtgagtggttaagtttaggtattcattgtgagtagttaagtttaggtattcattg

Function

NR:

description
PREDICTED: ankyrin repeat and IBR domain-containing protein 1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1732788 True 260 lncRNA 0.33 4 8319464 8319939

Neighbor

gene id symbol gene type direction distance location
LOC118941084 NA coding upstream 356384 7961999 ~ 7965688 (+)
spag17 spag17 coding upstream 372654 7891187 ~ 7946810 (+)
LOC110516423 LOC106574939 coding upstream 430760 7801623 ~ 7888704 (+)
LOC110511355 LOC106592813 coding upstream 522252 7758036 ~ 7801058 (+)
LOC110511354 LOC106575893 coding upstream 565740 7742795 ~ 7753724 (+)
LOC118941085 LOC106575914 coding downstream 149460 8469399 ~ 8472672 (+)
LOC110528836 chsta coding downstream 155113 8475052 ~ 8479361 (+)
LOC110528849 LOC105022557 coding downstream 178413 8498352 ~ 8506254 (+)
LOC118936321 LOC106575888 coding downstream 186200 8506139 ~ 8511196 (+)
LOC110495394 LOC106574832 coding downstream 304312 8623967 ~ 8676626 (+)
G1514135 NA non-coding upstream 98385 8220593 ~ 8221079 (+)
G1514125 NA non-coding upstream 122306 8196552 ~ 8197158 (+)
G1514096 NA non-coding upstream 210924 8106131 ~ 8108540 (+)
G1514093 NA non-coding upstream 220414 8098183 ~ 8099050 (+)
G1514080 LOC106594251 non-coding upstream 250008 8063851 ~ 8069456 (+)
G1514176 NA non-coding downstream 16217 8336156 ~ 8415932 (+)
G1514189 NA non-coding downstream 47275 8367214 ~ 8368476 (+)
G1514192 NA non-coding downstream 50508 8370447 ~ 8378393 (+)
G1514205 NA non-coding downstream 77257 8397196 ~ 8397461 (+)
G1514208 NA non-coding downstream 81263 8401202 ~ 8402168 (+)
G1514045 LOC106574979 other upstream 304434 8013860 ~ 8015030 (+)
G1513922 NA other upstream 697523 7620296 ~ 7621941 (+)
G1513874 NA other upstream 892493 7426583 ~ 7426971 (+)
LOC110513752 LOC106575969 other upstream 1222304 7032578 ~ 7102239 (+)
G1514180 NA other downstream 27288 8347227 ~ 8412799 (+)
G1514274 NA other downstream 256554 8576493 ~ 8576825 (+)
LOC110495395 LOC106574852 other downstream 358509 8677497 ~ 8682383 (+)

Expression


Co-expression Network