G1514949


Basic Information

Item Value
gene id G1514949
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 8870142 ~ 8870829 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1733787
GTTTAATTCAGTTCTGGATTTCATATGGCTACAACAGAATACAGTGTTTAATTCAGTTCTGGATTTCATATGGCTACAACAGAATACAGTGTTTAATTCAGTTCTGGATTTCATATGGCTACAACAGAATATAGTGTTTAATTCAGTTCTGGATTTCATATGGCTACAACAGAATACAGTGTTTAATTCAGTTCTGGATTTCATATGGCTACAACAGAATACAGTGTTTAATTCAGTCTGGATTTCATATGGCTACAACAGAATACAGTGTTTAATTCAGTTCTGGATTTCATATGGCTACAACAGAATACAGTGTTTAATTCAGTTCTGGATTTCATATGGCTACAACAGAATACAGTGTTTAATTAAGTTCTGGATTTCATATGGCTACAACAGAATACAGTGTTTAATTAAGTTCTGGATTTCATATGGCTACAACAGAATACAGTGTTTAATTCAGTTCTGGATTTCATATGGCTACAACAGAATACAGTGTTTAATTCAGTTCTGGATTTCATCACTGTTGAACTTTCAGAGCATGACATTTCTTTACCTCCTCCAATGCTGAGTAGATTTGACTGAAGTTTTGTGGTGAACTGCTTGTGTGGACGTGCTGTGTGGACGTGCTGTGTGGACGTGCTGTGTGGACGTGCTGTGTGGACGTGCTGTGTGGACGTGCTGTGTGGAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106602093

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1733787 True 688 lncRNA 0.37 1 8870142 8870829

Neighbor

gene id symbol gene type direction distance location
LOC118941058 NA coding upstream 17698 8847990 ~ 8852444 (+)
LOC110495389 mmadhc coding upstream 34717 8823529 ~ 8835425 (+)
LOC110495396 rnd3 coding upstream 126089 8718474 ~ 8744053 (+)
LOC110495395 LOC106574852 coding upstream 187759 8677497 ~ 8682383 (+)
LOC110495394 LOC106574832 coding upstream 193516 8623967 ~ 8676626 (+)
LOC110495382 orc4 coding downstream 58104 8928933 ~ 8933881 (+)
hsf2bp hsf2bp coding downstream 64366 8935195 ~ 8947637 (+)
LOC110496912 NA coding downstream 78032 8948861 ~ 8950192 (+)
LOC110496974 LOC106574764 coding downstream 79547 8950376 ~ 8968786 (+)
LOC110527296 LOC106575803 coding downstream 152287 9023116 ~ 9030662 (+)
G1514947 NA non-coding upstream 1023 8868841 ~ 8869119 (+)
G1514920 NA non-coding upstream 6546 8863328 ~ 8863596 (+)
G1514911 NA non-coding upstream 25516 8842854 ~ 8844626 (+)
G1514910 NA non-coding upstream 27394 8842449 ~ 8842748 (+)
G1514899 NA non-coding upstream 49962 8792941 ~ 8820180 (+)
G1514951 NA non-coding downstream 1353 8872182 ~ 8873111 (+)
G1514955 NA non-coding downstream 6254 8877083 ~ 8877916 (+)
G1514967 NA non-coding downstream 37093 8907922 ~ 8908881 (+)
G1514968 NA non-coding downstream 39323 8910152 ~ 8912132 (+)
G1514971 mbd5 non-coding downstream 47181 8918010 ~ 8918251 (+)
G1514274 NA other upstream 293317 8576493 ~ 8576825 (+)
LOC110528849 LOC105022557 other upstream 365806 8498352 ~ 8506254 (+)
G1514180 NA other upstream 457343 8347227 ~ 8412799 (+)
G1515005 cbs other downstream 129569 9000398 ~ 9003126 (+)
G1515776 NA other downstream 1103699 9974528 ~ 9975306 (+)
G1515853 NA other downstream 1299273 10170102 ~ 10171956 (+)
G1516136 NA other downstream 1448481 10310107 ~ 10327138 (+)
G1516637 NA other downstream 2145936 11016765 ~ 11017089 (+)

Expression


Co-expression Network