G1515432


Basic Information

Item Value
gene id G1515432
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 9486867 ~ 9488511 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1734495
CTATAAGGCTCATACAGCTATAACATGTTTGATATGCACTGATACATAACATGTCTCTCATACACATAATCATCAATCACAGAATAAAACACATAAAGGTATCATAAACAGTTCACAGATTTCATTAAAACGATACAATTGAGGACCCTCCCATACGTTTATTATGACTAGAAGGAAGTGTATAGGGTAGCTGCATCTCAAACCACAGTAGTGGTCGTGTTATAGTTCTTATTTGATCACAGGGATTTCACTGGTTGTACAGGGGAGGCATAGCAGCCTGGTCAATCAGACGGACTGCTGAACTCACGTTTAGTTTCACTTCGGGAATGTGAGCTATCGCGAGATCAGGCTGGTTTCACAAGACAAGAGGGATAACCATAGAACTTCCACTAACACACTAGCTATTCTCGTACCGTCTCTGCtcacacacttatacacactTATTATACCCTCTCCAACTCCATAACATATCTATTATCTATTATCTTCCTCTTCAAACCCTGACACATTATTATCTATGCCCTTTCACAGTCTAATAGCCTAAAATAGTTCACATTACTGTTTGTAGTACGATCCATATGAGTCCAGTGATAGGTCTTTAAACTGGCATAGGGGGTGTGTCCTCACTGTCCTGCAACGTCATTGGTTGTCATTGTCGTTGACCGGCAGCCACACCCATGGCACAGAGATCCTCATTGGATGGTCCAGGCAGAGCAGCTTCAATAATCCTGCCCTCCAATTCCagcagctggcctatctaaggggAAATGGCTCatttctgcctccaggacaagactcaagACAATAAACATCCACCTGCAGAACCTTATTTGAGTTCCAAAACAAACATAGAAAAGCATAGAAAACTTGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAGAGCACAGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAGAGCACAGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAGAGCACAGTAGAAAGGCTCAGAGTGGTAGGTAGGACAGGTCCAATCAAAGCACAGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAAAGCACAGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAGAGCACAGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAAAGCACAGTAGAACGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAGAGCACAGTAGAAAGGTTTGGGCTCACTGTTTTTTTGATCGTTTTGATTGTCTTGAGTTAGGCTTGGTTGTCAGGTTTTGGGATGTTGGGGGGCAGAGGTGGAAGGGGGCAGGGAGGAGGGTTAGGAGAAGTCCCACACCTCCTCTGTGGAGTGAGCGATGGCGGAGGTGGGGGGGTGGCAGGACGGGGTAGGGGAGCAGGACACATGGGGGTCATCGGGGCTGGAAACTCCAAGGGGCACCGCGGGGTACATGAGACTAAGGAAGGAGTCCCGGGTATGATGCCTTTTCACCTGTCATACAGTCCACAGAAAAATACATGAATACGAAGTCAGCCACACCGTGCCACAGAATGGAATCC
>TU1734496
CTATAAGGCTCATACAGCTATAACATGTTTGATATGCACTGATACATAACATGTCTCTCATACACATAATCATCAATCACAGAATAAAACACATAAAGGTATCATAAACAGTTCACAGATTTCATTAAAACGATACAATTGAGGACCCTCCCATACGTTTATTATGACTAGAAGGAAGTGTATAGGGTAGCTGCATCTCAAACCACAGTAGTGGTCGTGTTATAGTTCTTATTTGATCACAGGGATTTCACTGGTTGTACAGGGGAGGCATAGCAGCCTGGTCAATCAGACGGACTGCTGAACTCACGTTTAGTTTCACTTCGGGAATGTGAGCTATCGCGAGATCAGGCTGGTTTCACAAGACAAGAGGGATAACCATAGAACTTCCACTAACACACTAGCTATTCTCGTACCGTCTCTGCtcacacacttatacacactTATTATACCCTCTCCAACTCCATAACATATCTATTATCTATTATCTTCCTCTTCAAACCCTGACACATTATTATCTATGCCCTTTCACAGTCTAATAGCCTAAAATAGTTCACATTACTGTTTGTAGTACGATCCATATGAGTCCAGTGATAGGTCTTTAAACTGGCATAGGGGGTGTGTCCTCACTGTCCTGCAACGTCATTGGTTGTCATTGTCGTTGACCGGCAGCCACACCCATGGCACAGAGATCCTCATTGGATGGTCCAGGCAGAGCAGCTTCAATAATCCTGCCCTCCAATTCCagcagctggcctatctaaggggAAATGGCTCatttctgcctccaggacaagactcaagACAATAAACATCCACCTGCAGAACCTTATTTGAGTTCCAAAACAAACATAGAAAAGCATAGAAAACTTGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAGAGCACAGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAAAGCACAGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAAAGCACAGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAGAGCACAGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAAAGCACAGTAGAACGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAGAGCACAGTAGAAAGGTTTGGGCTCACTGTTTTTTTGATCGTTTTGATTGTCTTGAGTTAGGCTTGGTTGTCAGGTTTTGGGATGTTGGGGGGCAGAGGTGGAAGGGGGCAGGGAGGAGGGTTAGGAGAAGTCCCACACCTCCTCTGTGGAGTGAGCGATGGCGGAGGTGGGGGGGTGGCAGGACGGGGTAGGGGAGCAGGACACATGGGGGTCATCGGGGCTGGAAACTCCAAGGGGCACCGCGGGGTACATGAGACTAAGGAAGGAGTCCCGGGTATGATGCCTTTTCACCTGTCATACAGTCCACAGAAAAATACATGAATACGAAGTCAGCCACACCGTGCCACAGAATGGAATCC
>TU1734498
CTATAAGGCTCATACAGCTATAACATGTTTGATATGCACTGATACATAACATGTCTCTCATACACATAATCATCAATCACAGAATAAAACACATAAAGGTATCATAAACAGTTCACAGATTTCATTAAAACGATACAATTGAGGACCCTCCCATACGTTTATTATGACTAGAAGGAAGTGTATAGGGTAGCTGCATCTCAAACCACAGTAGTGGTCGTGTTATAGTTCTTATTTGATCACAGGGATTTCACTGGTTGTACAGGGGAGGCATAGCAGCCTGGTCAATCAGACGGACTGCTGAACTCACGTTTAGTTTCACTTCGGGAATGTGAGCTATCGCGAGATCAGGCTGGTTTCACAAGACAAGAGGGATAACCATAGAACTTCCACTAACACACTAGCTATTCTCGTACCGTCTCTGCtcacacacttatacacactTATTATACCCTCTCCAACTCCATAACATATCTATTATCTATTATCTTCCTCTTCAAACCCTGACACATTATTATCTATGCCCTTTCACAGTCTAATAGCCTAAAATAGTTCACATTACTGTTTGTAGTACGATCCATATGAGTCCAGTGATAGGTCTTTAAACTGGCATAGGGGGTGTGTCCTCACTGTCCTGCAACGTCATTGGTTGTCATTGTCGTTGACCGGCAGCCACACCCATGGCACAGAGATCCTCATTGGATGGTCCAGGCAGAGCAGCTTCAATAATCCTGCCCTCCAATTCCagcagctggcctatctaaggggAAATGGCTCatttctgcctccaggacaagactcaagACAATAAACATCCACCTGCAGAACCTTATTTGAGTTCCAAAACAAACATAGAAAAGCATAGAAAACTTGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAGAGCACAGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAGAGCACAGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAAAGCACAGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAAAGCACAGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAAAGCACAGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAGAGCACAGTAGAAAGGTTTGGGCTCACTGTTTTTTTGATCGTTTTGATTGTCTTGAGTTAGGCTTGGTTGTCAGGTTTTGGGATGTTGGGGGGCAGAGGTGGAAGGGGGCAGGGAGGAGGGTTAGGAGAAGTCCCACACCTCCTCTGTGGAGTGAGCGATGGCGGAGGTGGGGGGGTGGCAGGACGGGGTAGGGGAGCAGGACACATGGGGGTCATCGGGGCTGGAAACTCCAAGGGGCACCGCGGGGTACATGAGACTAAGGAAGGAGTCCCGGGTATGATGCCTTTTCACCTGTCATACAGTCCACAGAAAAATACATGAATACGAAGTCAGCCACACCGTGCCACAGAATGGAATCC
>TU1734501
CTATAAGGCTCATACAGCTATAACATGTTTGATATGCACTGATACATAACATGTCTCTCATACACATAATCATCAATCACAGAATAAAACACATAAAGGTATCATAAACAGTTCACAGATTTCATTAAAACGATACAATTGAGGACCCTCCCATACGTTTATTATGACTAGAAGGAAGTGTATAGGGTAGCTGCATCTCAAACCACAGTAGTGGTCGTGTTATAGTTCTTATTTGATCACAGGGATTTCACTGGTTGTACAGGGGAGGCATAGCAGCCTGGTCAATCAGACGGACTGCTGAACTCACGTTTAGTTTCACTTCGGGAATGTGAGCTATCGCGAGATCAGGCTGGTTTCACAAGACAAGAGGGATAACCATAGAACTTCCACTAACACACTAGCTATTCTCGTACCGTCTCTGCtcacacacttatacacactTATTATACCCTCTCCAACTCCATAACATATCTATTATCTATTATCTTCCTCTTCAAACCCTGACACATTATTATCTATGCCCTTTCACAGTCTAATAGCCTAAAATAGTTCACATTACTGTTTGTAGTACGATCCATATGAGTCCAGTGATAGGTCTTTAAACTGGCATAGGGGGTGTGTCCTCACTGTCCTGCAACGTCATTGGTTGTCATTGTCGTTGACCGGCAGCCACACCCATGGCACAGAGATCCTCATTGGATGGTCCAGGCAGAGCAGCTTCAATAATCCTGCCCTCCAATTCCagcagctggcctatctaaggggAAATGGCTCatttctgcctccaggacaagactcaagACAATAAACATCCACCTGCAGAACCTTATTTGAGTTCCAAAACAAACATAGAAAAGCATAGAAAACTTGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAGAGCACAGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAAAGCACAGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAGAGCACAGTAGAAAGGCTCAGAGTGGTAGGTAGGACAGGTCCAATCAAAGCACAGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAAAGCACAGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAGAGCACAGTAGAAAGGTTTGGGCTCACTGTTTTTTTGATCGTTTTGATTGTCTTGAGTTAGGCTTGGTTGTCAGGTTTTGGGATGTTGGGGGGCAGAGGTGGAAGGGGGCAGGGAGGAGGGTTAGGAGAAGTCCCACACCTCCTCTGTGGAGTGAGCGATGGCGGAGGTGGGGGGGTGGCAGGACGGGGTAGGGGAGCAGGACACATGGGGGTCATCGGGGCTGGAAACTCCAAGGGGCACCGCGGGGTACATGAGACTAAGGAAGGAGTCCCGGGTATGATGCCTTTTCACCTGTCATACAGTCCACAGAAAAATACATGAATACGAAGTCAGCCACACCGTGCCACAGAATGGAATCC
>TU1734502
CTATAAGGCTCATACAGCTATAACATGTTTGATATGCACTGATACATAACATGTCTCTCATACACATAATCATCAATCACAGAATAAAACACATAAAGGTATCATAAACAGTTCACAGATTTCATTAAAACGATACAATTGAGGACCCTCCCATACGTTTATTATGACTAGAAGGAAGTGTATAGGGTAGCTGCATCTCAAACCACAGTAGTGGTCGTGTTATAGTTCTTATTTGATCACAGGGATTTCACTGGTTGTACAGGGGAGGCATAGCAGCCTGGTCAATCAGACGGACTGCTGAACTCACGTTTAGTTTCACTTCGGGAATGTGAGCTATCGCGAGATCAGGCTGGTTTCACAAGACAAGAGGGATAACCATAGAACTTCCACTAACACACTAGCTATTCTCGTACCGTCTCTGCtcacacacttatacacactTATTATACCCTCTCCAACTCCATAACATATCTATTATCTATTATCTTCCTCTTCAAACCCTGACACATTATTATCTATGCCCTTTCACAGTCTAATAGCCTAAAATAGTTCACATTACTGTTTGTAGTACGATCCATATGAGTCCAGTGATAGGTCTTTAAACTGGCATAGGGGGTGTGTCCTCACTGTCCTGCAACGTCATTGGTTGTCATTGTCGTTGACCGGCAGCCACACCCATGGCACAGAGATCCTCATTGGATGGTCCAGGCAGAGCAGCTTCAATAATCCTGCCCTCCAATTCCagcagctggcctatctaaggggAAATGGCTCatttctgcctccaggacaagactcaagACAATAAACATCCACCTGCAGAACCTTATTTGAGTTCCAAAACAAACATAGAAAAGCATAGAAAACTTGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAGAGCACAGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAAAGCACAGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAGAGCACAGTAGAAAGGCTCAGAGTGGTAGGTAGGACAGGTCCAATCAAAGCACAGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAAAGCACAGTAGAAAGGCTCAGAGTGGTGGGTAGGACAGGTCCAATCAGAGCACAGTAGAAAGGTTTGGGCTCACTGTTTTTTTGATCGTTTTGATTGTCTTGAGTTAGGCTTGGTTGTCAGGTTTTGGGATGTTGGGGGGCAGAGGTGGAAGGGGGCAGGGAGGAGGGTTAGGAGAAGTCCCACACCTCCTCTGTGGAGTGAGCGATGGCGGAGGTGGGGGGGTGGCAGGACGGGGTAGGGGAGCAGGACACATGGGGGTCATCGGGGCTGGAAACTCCAAGGGGCACCGCGGGGTACATGAGACTAAGGAAGGAGTCCCGGGTATGATGCCTTTTCACCTGTCATACAGTCCACAGAAAAATACATGAATACGAAGTCAGCCACACCGTGCCACAGAATGGAATCC

Function

NR:

description
STE20-related kinase adapter protein beta-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1734495 False 1598 lncRNA 0.47 2 9486867 9488511
TU1734496 False 1504 lncRNA 0.47 2 9486867 9488511
TU1734498 False 1504 lncRNA 0.47 3 9486867 9488511
TU1734501 False 1504 lncRNA 0.47 3 9486867 9488511
TU1734502 True 1504 lncRNA 0.47 3 9486867 9488511

Neighbor

gene id symbol gene type direction distance location
LOC110495547 ptprn coding upstream 187224 9256574 ~ 9299643 (+)
LOC110497024 dnpep coding upstream 231462 9246827 ~ 9255405 (+)
LOC100653484 LOC106573841 coding upstream 326860 9134562 ~ 9160007 (+)
LOC110523347 LOC106595274 coding upstream 358209 9115618 ~ 9128658 (+)
LOC118941059 LOC106595274 coding upstream 375384 9108236 ~ 9111483 (+)
LOC110495570 LOC106573853 coding downstream 12997 9501508 ~ 9550995 (+)
LOC110527259 LOC106575807 coding downstream 253593 9742104 ~ 9765236 (+)
LOC110527263 LOC106598167 coding downstream 355054 9843565 ~ 9845412 (+)
LOC110527266 LOC106595105 coding downstream 362942 9851453 ~ 9854072 (+)
LOC110497036 LOC106575870 coding downstream 368340 9856851 ~ 9859254 (+)
G1515274 NA non-coding upstream 117128 9369440 ~ 9369739 (+)
G1515296 NA non-coding upstream 167135 9319285 ~ 9319732 (+)
G1515270 NA non-coding upstream 171420 9313463 ~ 9315447 (+)
G1515266 LOC106598125 non-coding upstream 175720 9301726 ~ 9311147 (+)
G1515444 NA non-coding downstream 22266 9510777 ~ 9511834 (+)
G1515445 NA non-coding downstream 25853 9514364 ~ 9517507 (+)
G1515492 NA non-coding downstream 82843 9571354 ~ 9571591 (+)
G1515536 LOC106575804 non-coding downstream 143101 9631612 ~ 9631832 (+)
G1515538 NA non-coding downstream 146092 9634603 ~ 9634819 (+)
G1515005 cbs other upstream 483741 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 806657 8677497 ~ 8682383 (+)
LOC110495394 LOC106574832 other upstream 810356 8623967 ~ 8676626 (+)
G1514274 NA other upstream 910042 8576493 ~ 8576825 (+)
LOC110528849 LOC105022557 other upstream 982531 8498352 ~ 8506254 (+)
G1515776 NA other downstream 486017 9974528 ~ 9975306 (+)
G1515853 NA other downstream 681591 10170102 ~ 10171956 (+)
G1516136 NA other downstream 830799 10310107 ~ 10327138 (+)
G1516637 NA other downstream 1528254 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 1597574 10978682 ~ 11092554 (+)

Expression


Co-expression Network